RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 ABT1Q9ULW3 272 aaKnown RBP5.48□□□□□ -1.53
LINC02397-201ENST00000504409 IGLV3-10A0A075B6K4 115 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 IGHV1-69-2A0A0G2JMI3 117 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 NME2P1O60361 137 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 EN2P19622 333 aaPredicted RBP5.48□□□□□ -1.53
LINC02397-201ENST00000504409 CD68P34810 354 aaPredicted RBP5.48□□□□□ -1.53
LINC02397-201ENST00000504409 HABP2Q14520 560 aaPredicted RBP5.48□□□□□ -1.53
LINC02397-201ENST00000504409 TAS1R1Q7RTX1 841 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 IRF7Q92985 503 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 SIGLEC11Q96RL6 698 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 C1QTNF9P0C862 333 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 CPMP14384 443 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 OR1L4Q8NGR5 311 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 OR1N2Q8NGR9 330 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 ZNF558Q96NG5 402 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 SHANK3Q9BYB0 1731 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 RHBDL1O75783 438 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 MPIG6BO95866 241 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 CD160O95971 181 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 SUSD1Q6UWL2 747 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 LRRTM1Q86UE6 522 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 LINC00116Q8NCU8 138 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 WFDC1Q9HC57 220 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 CYSLTR1Q9Y271 337 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 YBX2Q9Y2T7 364 aaKnown RBP5.48□□□□□ -1.53
LINC02397-201ENST00000504409 IGSF23A1L1A6 192 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 PYCARD-AS1I3L0S3 204 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 MRPL3P09001 348 aaKnown RBP5.48□□□□□ -1.53
LINC02397-201ENST00000504409 GDF5P43026 501 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 MEF2BQ02080 365 aaPredicted RBP5.48□□□□□ -1.53
LINC02397-201ENST00000504409 PUSL1Q8N0Z8 303 aaKnown RBP5.48□□□□□ -1.53
LINC02397-201ENST00000504409 BPIFA1Q9NP55 256 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 FLRT3Q9NZU0 649 aa5.48□□□□□ -1.53
LINC02397-201ENST00000504409 GREB1LQ9C091 1923 aaPredicted RBP5.47□□□□□ -1.53
LINC02397-201ENST00000504409 ANTXRLA6NF34 631 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 FUT1P19526 365 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 MPLP40238 635 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 RPS11P62280 158 aaKnown RBP eCLIP5.47□□□□□ -1.53
LINC02397-201ENST00000504409 AKR1C1Q04828 323 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 PIN1Q13526 163 aaPredicted RBP5.47□□□□□ -1.53
LINC02397-201ENST00000504409 OR11H7Q8NGC8 314 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 OR10G8Q8NGN5 311 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 OR4A16Q8NH70 328 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 CNTD2Q9H8S5 307 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 SPINT3P49223 89 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 CTXN1P60606 82 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 RIGQ13278 110 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 C9orf152Q5JTZ5 239 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 NPSR1Q6W5P4 371 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 OR2C3Q8N628 320 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 SMPXQ9UHP9 88 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 HSF4Q9ULV5 492 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 ZC3H12DA2A288 527 aaKnown RBP5.47□□□□□ -1.53
LINC02397-201ENST00000504409 TMEM150BA6NC51 233 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 ACAA2P42765 397 aaKnown RBP5.47□□□□□ -1.53
LINC02397-201ENST00000504409 RIPPLY3P57055 190 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 ACKR1Q16570 336 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 C1orf194Q5T5A4 169 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 DHRS13Q6UX07 377 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 TMEM182Q6ZP80 229 aaPredicted RBP5.47□□□□□ -1.53
LINC02397-201ENST00000504409 CYB561A3Q8NBI2 242 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 GINS3Q9BRX5 216 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 A0A087WUU8 490 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 SLC5A10A0PJK1 596 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 FAM221AA4D161 298 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 NPIPB13A6NJU9 1138 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 NPIPB4C9JG80 1138 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 M0QZQ0 153 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 FGF16O43320 207 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 SEMA4FO95754 770 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 SHC1P29353 583 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 POLR2IP36954 125 aaKnown RBP5.47□□□□□ -1.53
LINC02397-201ENST00000504409 TAF10Q12962 218 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 CRMP1Q14194 572 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 FAM71F2Q6NXP2 309 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 HIST1H2BAQ96A08 127 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 LSM2Q9Y333 95 aaKnown RBP5.47□□□□□ -1.53
LINC02397-201ENST00000504409 BOLA1Q9Y3E2 137 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 TRBV23-1A0A0A0MS06 115 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 A0A1B0GVT2 93 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 PHF1O43189 567 aaPredicted RBP5.47□□□□□ -1.53
LINC02397-201ENST00000504409 SOX2P48431 317 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 FAM98CQ17RN3 349 aaKnown RBP5.47□□□□□ -1.53
LINC02397-201ENST00000504409 HLA-DRB5Q30154 266 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 SPATA45Q537H7 98 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 GPR32P1Q8NGA4 272 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 C5orf30Q96GV9 206 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 DERL3Q96Q80 235 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 OVOL2Q9BRP0 275 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 VN1R3Q9BXE9 311 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 MS4A8Q9BY19 250 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 UPK1AO00322 258 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 PLA2G10O15496 165 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 NPIPB7O75200 414 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 CFHP08603 1231 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 GABRA3P34903 492 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 APOBEC1P41238 236 aaKnown RBP5.47□□□□□ -1.53
LINC02397-201ENST00000504409 ZNF528Q3MIS6 628 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 MESTQ5EB52 335 aa5.47□□□□□ -1.53
LINC02397-201ENST00000504409 DMKNQ6E0U4 476 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms