RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 LRIF1Q5T3J3 769 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 SLC18B1Q6NT16 456 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 TBPL2Q6SJ96 375 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 BAIAP2L2Q6UXY1 529 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 MSANTD1Q6ZTZ1 278 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 FAM122BQ7Z309 247 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 CENPVQ7Z7K6 275 aaPredicted RBP2.88□□□□□ -1.95
USP46-205ENST00000504078 OAFQ86UD1 273 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 HAPLN4Q86UW8 402 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 MREGQ8N565 214 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 OR1M1Q8NGA1 313 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 NDNFQ8TB73 568 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 NPRL2Q8WTW4 380 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 BPIFA2Q96DR5 249 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 ZNF503Q96F45 646 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 TPD52L3Q96J77 140 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 ZNF488Q96MN9 340 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 NOL4LQ96MY1 436 aaPredicted RBP2.88□□□□□ -1.95
USP46-205ENST00000504078 ZNF583Q96ND8 569 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 ELAC2Q9BQ52 826 aaKnown RBP2.88□□□□□ -1.95
USP46-205ENST00000504078 FAM110AQ9BQ89 295 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 EBF4Q9BQW3 602 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 COPS4Q9BT78 406 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 NUAK2Q9H093 628 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 TMEM38AQ9H6F2 299 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 YY1AP1Q9H869 796 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 KCNK9Q9NPC2 374 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 PNRC2Q9NPJ4 139 aaKnown RBP2.88□□□□□ -1.95
USP46-205ENST00000504078 SDR39U1Q9NRG7 319 aaPredicted RBP2.88□□□□□ -1.95
USP46-205ENST00000504078 TAS2R1Q9NYW7 299 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 KAAG1Q9UBP8 84 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 GRHPRQ9UBQ7 328 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 LGALS13Q9UHV8 139 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 HAO1Q9UJM8 370 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 LSM4Q9Y4Z0 139 aaKnown RBP2.88□□□□□ -1.95
USP46-205ENST00000504078 SNX13Q9Y5W8 968 aa2.88□□□□□ -1.95
USP46-205ENST00000504078 IGKV1D-17A0A075B6S4 117 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 IGLV1-36A0A0B4J1U3 117 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 PSMB11A5LHX3 300 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 NPIPB13A6NJU9 1138 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 TRPC5OSA6NMA1 111 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 ANKRD30BLA7E2S9 258 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 EVPLLA8MZ36 301 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 SEC14L6B5MCN3 397 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 NPIPB4C9JG80 1138 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 SIGLEC5O15389 551 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 NDUFA2O43678 99 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 RHBDL1O75783 438 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 DNAJC8O75937 253 aaPredicted RBP2.87□□□□□ -1.95
USP46-205ENST00000504078 JTBO76095 146 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 DUS4LO95620 317 aaKnown RBP2.87□□□□□ -1.95
USP46-205ENST00000504078 FSTL3O95633 263 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 LHBP01229 141 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 ALDOBP05062 364 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 ANXA2P07355 339 aaKnown RBP2.87□□□□□ -1.95
USP46-205ENST00000504078 CD14P08571 375 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 TSPAN19P0C672 248 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 FRMD6-AS1P0C7T7 363 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 TROVE2P10155 538 aaKnown RBP eCLIP2.87□□□□□ -1.95
USP46-205ENST00000504078 MUC1P15941 1255 aaPredicted RBP2.87□□□□□ -1.95
USP46-205ENST00000504078 FAHP16930 419 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 PPIBP23284 216 aaKnown RBP2.87□□□□□ -1.95
USP46-205ENST00000504078 RBM34P42696 430 aaKnown RBP2.87□□□□□ -1.95
USP46-205ENST00000504078 CDKN2AP42771 156 aaKnown RBP2.87□□□□□ -1.95
USP46-205ENST00000504078 FXYD6P3P58550 94 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 RPL23AP62750 156 aaKnown RBP2.87□□□□□ -1.95
USP46-205ENST00000504078 MXRA7P84157 204 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 SF3A3Q12874 501 aaKnown RBP eCLIP2.87□□□□□ -1.95
USP46-205ENST00000504078 DCTN2Q13561 401 aaKnown RBP2.87□□□□□ -1.95
USP46-205ENST00000504078 NFYCQ13952 458 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 EDDM3AQ14507 147 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 TIGD6Q17RP2 521 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 UNQ9370/PRO34162Q6UXP9 181 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 ZNF730Q6ZMV8 503 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 ZNF788Q6ZQV5 615 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 TMPRSS11FQ6ZWK6 438 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 OR2W3Q7Z3T1 314 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 VTCN1Q7Z7D3 282 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 C11orf53Q8IXP5 236 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 TPRX1Q8N7U7 411 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 SLC26A10Q8NG04 563 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 OR51D1Q8NGF3 324 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 OR51L1Q8NGJ5 315 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 OR4K13Q8NH42 304 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 OR10A6Q8NH74 314 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 FANK1Q8TC84 345 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 LRRC8CQ8TDW0 803 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 HPSE2Q8WWQ2 592 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 ERGIC1Q969X5 290 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 ISOC1Q96CN7 298 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 FOXRED1Q96CU9 486 aaPredicted RBP2.87□□□□□ -1.95
USP46-205ENST00000504078 RAX2Q96IS3 184 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 RSRC1Q96IZ7 334 aaKnown RBP2.87□□□□□ -1.95
USP46-205ENST00000504078 PRRC1Q96M27 445 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 RAB3IPQ96QF0 476 aaPredicted RBP2.87□□□□□ -1.95
USP46-205ENST00000504078 NMNAT3Q96T66 252 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 SLC25A33Q9BSK2 321 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 TMEM120AQ9BXJ8 343 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 ISYNA1Q9NPH2 558 aa2.87□□□□□ -1.95
USP46-205ENST00000504078 RPRD1BQ9NQG5 326 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms