RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 DUX4L9Q6RFH8 374 aaPredicted RBP18.25■□□□□ 0.51
LSM6-203ENST00000503982 ZDHHC23Q8IYP9 409 aa18.25■□□□□ 0.51
LSM6-203ENST00000503982 FGFRL1Q8N441 504 aa18.25■□□□□ 0.51
LSM6-203ENST00000503982 FAM216BQ8N7L0 139 aa18.25■□□□□ 0.51
LSM6-203ENST00000503982 OR5T2Q8NGG2 359 aa18.25■□□□□ 0.51
LSM6-203ENST00000503982 TRUB1Q8WWH5 349 aaKnown RBP18.25■□□□□ 0.51
LSM6-203ENST00000503982 H1FXQ92522 213 aaKnown RBP18.25■□□□□ 0.51
LSM6-203ENST00000503982 SEH1LQ96EE3 360 aa18.25■□□□□ 0.51
LSM6-203ENST00000503982 TTTY10Q9BZA0 68 aa18.25■□□□□ 0.51
LSM6-203ENST00000503982 NOX4Q9NPH5 578 aa18.25■□□□□ 0.51
LSM6-203ENST00000503982 KAAG1Q9UBP8 84 aa18.25■□□□□ 0.51
LSM6-203ENST00000503982 DUX4Q9UBX2 424 aa18.25■□□□□ 0.51
LSM6-203ENST00000503982 CENPVL3A0A0U1RRI6 287 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 TMEM210A6NLX4 147 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 POLR2IP36954 125 aaKnown RBP18.24■□□□□ 0.51
LSM6-203ENST00000503982 RIPK1Q13546 671 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 LRRC10Q5BKY1 277 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 THAP5Q7Z6K1 395 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 TMEM163Q8TC26 289 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 TMIGD2Q96BF3 282 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 ITPKCQ96DU7 683 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 LYZL4Q96KX0 146 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 MBOAT4Q96T53 435 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 MROQ9BYG7 248 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 YIPF3Q9GZM5 350 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 CNTD2Q9H8S5 307 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 ZNF391Q9UJN7 358 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 IKZF2Q9UKS7 526 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 GTF2A1LQ9UNN4 478 aa18.24■□□□□ 0.51
LSM6-203ENST00000503982 SRRM5B3KS81 715 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 DLGAP1O14490 977 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 PRKYO43930 277 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 MMP9P14780 707 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 ACKR3P25106 362 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 MAP2K3P46734 347 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 SLC25A30Q5SVS4 291 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 AADACL4Q5VUY2 407 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 NXNL2Q5VZ03 156 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 FIP1L1Q6UN15 594 aaKnown RBP18.23■□□□□ 0.51
LSM6-203ENST00000503982 Q6YL49 198 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 OR8J1Q8NGP2 316 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 FAM71F1Q96KD3 344 aaPredicted RBP18.23■□□□□ 0.51
LSM6-203ENST00000503982 SIRPDQ9H106 197 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 RIBC2Q9H4K1 309 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 ACOXLQ9NUZ1 547 aa18.23■□□□□ 0.51
LSM6-203ENST00000503982 H2AFY2Q9P0M6 372 aaPredicted RBP18.23■□□□□ 0.51
LSM6-203ENST00000503982 RPUSD1Q9UJJ7 312 aaKnown RBP18.23■□□□□ 0.51
LSM6-203ENST00000503982 IGHV1-69DA0A0B4J2H0 117 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 TMEM269A0A1B0GVZ9 245 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 FAM181BA6NEQ2 426 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 SLC16A6O15403 523 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 AKR7A2O43488 359 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 CST4P01036 141 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 IGHV1-69P01742 117 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 ALOX5APP20292 161 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 MDKP21741 143 aaPredicted RBP18.22■□□□□ 0.51
LSM6-203ENST00000503982 SLC34A1Q06495 639 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 VMO1Q7Z5L0 202 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 CMTM4Q8IZR5 234 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 OR10Z1Q8NGY1 313 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 OR5P3Q8WZ94 311 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 TEAD3Q99594 435 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 SMPD3Q9NY59 655 aaPredicted RBP18.22■□□□□ 0.51
LSM6-203ENST00000503982 HAO2Q9NYQ3 351 aa18.22■□□□□ 0.51
LSM6-203ENST00000503982 ZNF816-ZNF321PA0A0X1KG74 233 aa18.21■□□□□ 0.51
LSM6-203ENST00000503982 MELTFP08582 738 aa18.21■□□□□ 0.51
LSM6-203ENST00000503982 PEX2P28328 305 aa18.21■□□□□ 0.51
LSM6-203ENST00000503982 GABRA2P47869 451 aa18.21■□□□□ 0.51
LSM6-203ENST00000503982 GPM6AP51674 278 aa18.21■□□□□ 0.51
LSM6-203ENST00000503982 RIDAP52758 137 aaKnown RBP18.21■□□□□ 0.51
LSM6-203ENST00000503982 CDC42P60953 191 aa18.21■□□□□ 0.51
LSM6-203ENST00000503982 CEP78Q5JTW2 689 aa18.21■□□□□ 0.51
LSM6-203ENST00000503982 MOB3CQ70IA8 216 aa18.21■□□□□ 0.51
LSM6-203ENST00000503982 TBC1D15Q8TC07 691 aa18.21■□□□□ 0.51
LSM6-203ENST00000503982 C12orf43Q96C57 262 aaKnown RBP18.21■□□□□ 0.51
LSM6-203ENST00000503982 TLNRD1Q9H1K6 362 aa18.21■□□□□ 0.51
LSM6-203ENST00000503982 WDR13Q9H1Z4 485 aa18.21■□□□□ 0.51
LSM6-203ENST00000503982 FAM96BQ9Y3D0 163 aa18.21■□□□□ 0.51
LSM6-203ENST00000503982 TMEM14AQ9Y6G1 99 aa18.21■□□□□ 0.51
LSM6-203ENST00000503982 POM121CA8CG34 1229 aa18.2■□□□□ 0.5
LSM6-203ENST00000503982 ZNF732B4DXR9 585 aa18.2■□□□□ 0.5
LSM6-203ENST00000503982 RRP9O43818 475 aaKnown RBP18.2■□□□□ 0.5
LSM6-203ENST00000503982 FCN3O75636 299 aa18.2■□□□□ 0.5
LSM6-203ENST00000503982 NDUFB7P17568 137 aa18.2■□□□□ 0.5
LSM6-203ENST00000503982 GLRA1P23415 457 aa18.2■□□□□ 0.5
LSM6-203ENST00000503982 SNRPGP62308 76 aaKnown RBP18.2■□□□□ 0.5
LSM6-203ENST00000503982 TMED1Q13445 227 aa18.2■□□□□ 0.5
LSM6-203ENST00000503982 C11orf91Q3C1V1 193 aa18.2■□□□□ 0.5
LSM6-203ENST00000503982 ZNF829Q3KNS6 432 aaPredicted RBP18.2■□□□□ 0.5
LSM6-203ENST00000503982 CDONQ4KMG0 1287 aa18.2■□□□□ 0.5
LSM6-203ENST00000503982 GID4Q8IVV7 300 aa18.2■□□□□ 0.5
LSM6-203ENST00000503982 TCEANCQ8N8B7 351 aa18.2■□□□□ 0.5
LSM6-203ENST00000503982 CNN2Q99439 309 aaKnown RBP18.2■□□□□ 0.5
LSM6-203ENST00000503982 PBOV1Q9GZY1 135 aa18.2■□□□□ 0.5
LSM6-203ENST00000503982 KPTNQ9Y664 436 aa18.2■□□□□ 0.5
LSM6-203ENST00000503982 A0A1B0GVI7 797 aa18.19■□□□□ 0.5
LSM6-203ENST00000503982 A0A1W2PQ09 198 aa18.19■□□□□ 0.5
LSM6-203ENST00000503982 CCDC182A6NF36 153 aa18.19■□□□□ 0.5
LSM6-203ENST00000503982 SLC22A31A6NKX4 558 aa18.19■□□□□ 0.5
LSM6-203ENST00000503982 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms