RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 TRAV6A0A075B6T7 132 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 FIGNL2A6NMB9 653 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 TPOP07202 933 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 H2AFB2P0C5Z0 115 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 AKAIN1P0CW23 69 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 GTF2F2P13984 249 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 PSMB1P20618 241 aaKnown RBP19.01■□□□□ 0.63
PTPN13-205ENST00000502971 ATP1B3P54709 279 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 TAS2R19P59542 299 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 RPS27AP62979 156 aaKnown RBP19.01■□□□□ 0.63
PTPN13-205ENST00000502971 C1orf185Q5T7R7 199 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 SEM1Q6ZVN7 128 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 MOB3CQ70IA8 216 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 GABRG1Q8N1C3 465 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 FAM89BQ8N5H3 189 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 TMEM229BQ8NBD8 167 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 DRAXINQ8NBI3 349 aaPredicted RBP19.01■□□□□ 0.63
PTPN13-205ENST00000502971 CSNK2A3Q8NEV1 391 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 OR5L1Q8NGL2 311 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 OR56B4Q8NH76 319 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 MS4A3Q96HJ5 214 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 NICN1Q9BSH3 213 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 ZMAT3Q9HA38 289 aaKnown RBP19.01■□□□□ 0.63
PTPN13-205ENST00000502971 MCUBQ9NWR8 336 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 LUZP4Q9P127 313 aa19.01■□□□□ 0.63
PTPN13-205ENST00000502971 A0A0A6YYD4 124 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 TMEM235A6NFC5 223 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 ZNF14P17017 642 aaPredicted RBP19■□□□□ 0.63
PTPN13-205ENST00000502971 MRPL49Q13405 166 aaKnown RBP19■□□□□ 0.63
PTPN13-205ENST00000502971 PLCXD3Q63HM9 321 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 ZNF324BQ6AW86 544 aaPredicted RBP19■□□□□ 0.63
PTPN13-205ENST00000502971 RTL6Q6ICC9 239 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 CMBLQ96DG6 245 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 STARD4Q96DR4 205 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 TM2D1Q9BX74 207 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 SELENOIQ9C0D9 397 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 METTL9Q9H1A3 318 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 PTTG3PQ9NZH4 202 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 ACACBO00763 2458 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 DOCK7Q96N67 2140 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 A0A1W2PP11 408 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 MEIS3P1A6NDR6 274 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 NGFP01138 241 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 CGAP01215 116 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 HOXD4P09016 255 aaPredicted RBP19■□□□□ 0.63
PTPN13-205ENST00000502971 GSTP1P09211 210 aaKnown RBP19■□□□□ 0.63
PTPN13-205ENST00000502971 TMEM225BP0DP42 221 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 MGMTP16455 207 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 WNT5AP41221 380 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 RAB25P57735 213 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 ASCL4Q6XD76 172 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 FTMTQ8N4E7 242 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 OR56B2PQ8NGI1 322 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 RAB3CQ96E17 227 aa19■□□□□ 0.63
PTPN13-205ENST00000502971 IGKV1-27A0A075B6S5 117 aa18.99■□□□□ 0.63
PTPN13-205ENST00000502971 CST4P01036 141 aa18.99■□□□□ 0.63
PTPN13-205ENST00000502971 SERPINA2P20848 420 aa18.99■□□□□ 0.63
PTPN13-205ENST00000502971 HOXC12P31275 282 aa18.99■□□□□ 0.63
PTPN13-205ENST00000502971 RCVRNP35243 200 aa18.99■□□□□ 0.63
PTPN13-205ENST00000502971 FJX1Q86VR8 437 aa18.99■□□□□ 0.63
PTPN13-205ENST00000502971 OR51T1Q8NGJ9 327 aa18.99■□□□□ 0.63
PTPN13-205ENST00000502971 OR4C16Q8NGL9 310 aa18.99■□□□□ 0.63
PTPN13-205ENST00000502971 OR6F1Q8NGZ6 308 aa18.99■□□□□ 0.63
PTPN13-205ENST00000502971 FAM57AQ8TBR7 257 aa18.99■□□□□ 0.63
PTPN13-205ENST00000502971 C20orf85Q9H1P6 137 aa18.99■□□□□ 0.63
PTPN13-205ENST00000502971 ELF5Q9UKW6 265 aaPredicted RBP18.99■□□□□ 0.63
PTPN13-205ENST00000502971 CACNA1GO43497 2377 aa18.99■□□□□ 0.63
PTPN13-205ENST00000502971 SOCS1O15524 211 aa18.98■□□□□ 0.63
PTPN13-205ENST00000502971 ZNF780AO75290 641 aaPredicted RBP18.98■□□□□ 0.63
PTPN13-205ENST00000502971 GNB3P16520 340 aa18.98■□□□□ 0.63
PTPN13-205ENST00000502971 TIMP3P35625 211 aa18.98■□□□□ 0.63
PTPN13-205ENST00000502971 P2RY6Q15077 328 aa18.98■□□□□ 0.63
PTPN13-205ENST00000502971 PNLIPRP3Q17RR3 467 aa18.98■□□□□ 0.63
PTPN13-205ENST00000502971 STEAP1BQ6NZ63 245 aa18.98■□□□□ 0.63
PTPN13-205ENST00000502971 CD163Q86VB7 1156 aa18.98■□□□□ 0.63
PTPN13-205ENST00000502971 C17orf78Q8N4C9 275 aa18.98■□□□□ 0.63
PTPN13-205ENST00000502971 ELL3Q9HB65 397 aaPredicted RBP18.98■□□□□ 0.63
PTPN13-205ENST00000502971 FAM215AQ9Y5M1 114 aa18.98■□□□□ 0.63
PTPN13-205ENST00000502971 C7orf66A4D0T2 115 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 ZNF850A8MQ14 1090 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 ICMTO60725 284 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 CYB5AP00167 134 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 CBR1P16152 277 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 HIST1H1DP16402 221 aaKnown RBP18.97■□□□□ 0.63
PTPN13-205ENST00000502971 EIF2B2P49770 351 aaKnown RBP18.97■□□□□ 0.63
PTPN13-205ENST00000502971 HLXQ14774 488 aaPredicted RBP18.97■□□□□ 0.63
PTPN13-205ENST00000502971 FAAP20Q6NZ36 180 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 BEND4Q6ZU67 534 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 TRAPPC6BQ86SZ2 158 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 ZNF610Q8N9Z0 462 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 WBP1Q96G27 269 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 EIF3KQ9UBQ5 218 aaKnown RBP18.97■□□□□ 0.63
PTPN13-205ENST00000502971 TOXO94900 526 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 NDUFB6O95139 128 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 IL2RAP01589 272 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 CD3DP04234 171 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 CPT2P23786 658 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 TMEM50BP56557 158 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 ARL6IP1Q15041 203 aa18.97■□□□□ 0.63
PTPN13-205ENST00000502971 RSU1Q15404 277 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms