RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 DUX4L2P0CJ85 424 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 DUX4L3P0CJ86 424 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 DUX4L4P0CJ87 422 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 DUX4L5P0CJ88 424 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 DUX4L6P0CJ89 424 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 DUX4L7P0CJ90 424 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 TUSC1Q2TAM9 212 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 CEACAM21Q3KPI0 293 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 ZBTB37Q5TC79 503 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 DUX4L9Q6RFH8 374 aaPredicted RBP15.26■□□□□ 0.03
HOXD11-202ENST00000498438 ELMOD2Q8IZ81 293 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 CBR4Q8N4T8 237 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 YIPF7Q8N8F6 280 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 ZDHHC22Q8N966 263 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 OR2T27Q8NH04 317 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 RFKQ969G6 155 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 C12orf43Q96C57 262 aaKnown RBP15.26■□□□□ 0.03
HOXD11-202ENST00000498438 CCL13Q99616 98 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 WDR13Q9H1Z4 485 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 DUX4Q9UBX2 424 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 ENPP5Q9UJA9 477 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 SNX5Q9Y5X3 404 aa15.26■□□□□ 0.03
HOXD11-202ENST00000498438 ZNF732B4DXR9 585 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 AKR7A2O43488 359 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 ATP6V1E1P36543 226 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 GNG3P63215 75 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 TMED1Q13445 227 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 ZIK1Q3SY52 487 aaPredicted RBP15.25■□□□□ 0.03
HOXD11-202ENST00000498438 PLCXD3Q63HM9 321 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 MOB3CQ70IA8 216 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 C10orf67Q8IYJ2 551 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 FGFRL1Q8N441 504 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 FAM216BQ8N7L0 139 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 ST8SIA4Q92187 359 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 UBE2FQ969M7 185 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 HRASLS5Q96KN8 279 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 MS4A7Q9GZW8 240 aaPredicted RBP15.25■□□□□ 0.03
HOXD11-202ENST00000498438 DNAJB11Q9UBS4 358 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 SLC22A13Q9Y226 551 aa15.25■□□□□ 0.03
HOXD11-202ENST00000498438 FBN3Q75N90 2809 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 E9PQ18 207 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 P2RY10O00398 339 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 MTRF1O75570 445 aaKnown RBP15.24■□□□□ 0.03
HOXD11-202ENST00000498438 RHBDL1O75783 438 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 PLATP00750 562 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 ACTG1P63261 375 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 ZNF684Q5T5D7 378 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 STUMQ69YW2 141 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 RBMS3Q6XE24 437 aaKnown RBP15.24■□□□□ 0.03
HOXD11-202ENST00000498438 BTN2A1Q7KYR7 527 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 DOK3Q7L591 496 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 SLC36A1Q7Z2H8 476 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 PNLDC1Q8NA58 520 aaKnown RBP15.24■□□□□ 0.03
HOXD11-202ENST00000498438 OR5T2Q8NGG2 359 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 FAM216AQ8WUB2 273 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 TRUB1Q8WWH5 349 aaKnown RBP15.24■□□□□ 0.03
HOXD11-202ENST00000498438 ZNF48Q96MX3 618 aaPredicted RBP15.24■□□□□ 0.03
HOXD11-202ENST00000498438 RAB3IPQ96QF0 476 aaPredicted RBP15.24■□□□□ 0.03
HOXD11-202ENST00000498438 OR51I2Q9H344 312 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 S100A14Q9HCY8 104 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 SNTG1Q9NSN8 517 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 V9GYS6 101 aa15.24■□□□□ 0.03
HOXD11-202ENST00000498438 A0A1B0GTI1 187 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 METTL15A6NJ78 407 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 OR5B21A6NL26 309 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 ZNF879B4DU55 563 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 ENTPD6O75354 484 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 NRASP01111 189 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 LIPFP07098 398 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 SFTPBP07988 381 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 UBA52P62987 128 aaKnown RBP15.23■□□□□ 0.03
HOXD11-202ENST00000498438 ODF4Q2M2E3 257 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 C9orf139Q6ZV77 190 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 CATSPERDQ86XM0 798 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 OR5A2Q8NGI9 324 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 OR14K1Q8NGZ2 314 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 MBOAT4Q96T53 435 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 PCGF1Q9BSM1 259 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.23■□□□□ 0.03
HOXD11-202ENST00000498438 SOX21Q9Y651 276 aaPredicted RBP15.23■□□□□ 0.03
HOXD11-202ENST00000498438 TENM1Q9UKZ4 2725 aa15.23■□□□□ 0.03
HOXD11-202ENST00000498438 NKX6-3A6NJ46 265 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 SULT1C4O75897 302 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 ECDO95905 644 aaPredicted RBP15.22■□□□□ 0.03
HOXD11-202ENST00000498438 TFF1P04155 84 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 SELLP14151 372 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 MMP9P14780 707 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 AMY2BP19961 511 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 CCL1P22362 96 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 MTNR1AP48039 350 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 SNRPGP62308 76 aaKnown RBP15.22■□□□□ 0.03
HOXD11-202ENST00000498438 ZNF85Q03923 595 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 IKZF1Q13422 519 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 C11orf91Q3C1V1 193 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 CLVS2Q5SYC1 327 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 ATPAF1Q5TC12 328 aaPredicted RBP15.22■□□□□ 0.03
HOXD11-202ENST00000498438 TMEM42Q69YG0 159 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 HAGHLQ6PII5 290 aaPredicted RBP15.22■□□□□ 0.03
HOXD11-202ENST00000498438 BRD3OSQ6XYD6 125 aa15.22■□□□□ 0.03
HOXD11-202ENST00000498438 AQP3Q92482 292 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms