RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 GALNT9Q9HCQ5 603 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 FAIMQ9NVQ4 179 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 GIN1Q9NXP7 522 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 C5AR2Q9P296 337 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 CHORDC1Q9UHD1 332 aaPredicted RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 LGALS13Q9UHV8 139 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 ATPIF1Q9UII2 106 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 ZNF391Q9UJN7 358 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 FBN2P35556 2912 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 TNFSF12-TNFSF13A0A0A6YY99 330 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 KBTBD11-OT1A0A1B0GTJ5 212 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 A0A1W2PPM1 405 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 GAGE12BA1L429 117 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 GAGE12HA6NDE8 117 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 C17orf51A8MQB3 221 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 CDRT15L2A8MXV6 281 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 HMGB1P1B2RPK0 211 aaPredicted RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 C3orf84H3BNL1 204 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 PTGESO14684 152 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 GMDSO60547 372 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 WDR1O75083 606 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 UPK3AO75631 287 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 RFPL3O75679 317 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 BEST1O76090 585 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 IFNA5P01569 189 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 SERPINA5P05154 406 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 PTMAP06454 111 aaKnown RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 ATXN1LP0C7T5 689 aaKnown RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 CXCR1P25024 350 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 CXCR2P25025 360 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 GPR12P47775 334 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 OMPP47874 163 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 UBE2MP61081 183 aaKnown RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 HBA1P69905 142 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 HGFACQ04756 655 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 PIN1Q13526 163 aaPredicted RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 CT45A1Q5HYN5 189 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 TEX30Q5JUR7 227 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 OGFRL1Q5TC84 451 aaPredicted RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 PIP4P1Q86T03 277 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 WDR49Q8IV35 697 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 IQCF1Q8N6M8 205 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 ZNF565Q8N9K5 539 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 ZNF439Q8NDP4 499 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 OR4K14Q8NGD5 310 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 TYMSOSQ8TAI1 123 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 RHEBL1Q8TAI7 183 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 VN1R17PQ8TDU5 208 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 TSEN15Q8WW01 171 aaKnown RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 LINC00476Q8WZB0 136 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 C14orf79Q96F83 325 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 BOD1Q96IK1 185 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 DHRS9Q9BPW9 319 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 CCDC28BQ9BUN5 200 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 NTMT1Q9BV86 223 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 GLIPR2Q9H4G4 154 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 ZNF442Q9H7R0 627 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 ASCL3Q9NQ33 180 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 UQCC1Q9NVA1 299 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 HAO2Q9NYQ3 351 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 PSENENQ9NZ42 101 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 SNX12Q9UMY4 172 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 HES2Q9Y543 173 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 TEX264Q9Y6I9 313 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 TRBV23-1A0A0A0MS06 115 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 PMS2P5A8MQ11 134 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 E7ENQ6 273 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 E9PLD3 99 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 KPNA3O00505 521 aaPredicted RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 GPR39O43194 453 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 CACNG3O60359 315 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 SLC25A12O75746 678 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 IGHV4-59P01825 116 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 EIF2S1P05198 315 aaKnown RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 ZNF28P17035 718 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 KITLGP21583 273 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 POLR2IP36954 125 aaKnown RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 GRIA1P42261 906 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 XCR1P46094 333 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 VEGFCP49767 419 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 DIO1P49895 249 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 NFE2Q16621 373 aaPredicted RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 RPEL1Q2QD12 228 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 TMEM176BQ3YBM2 270 aaPredicted RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 SLC39A12Q504Y0 691 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 COQ5Q5HYK3 327 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 C18orf63Q68DL7 685 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 DHRS7BQ6IAN0 325 aaPredicted RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 LCN10Q6JVE6 187 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 CRIP3Q6Q6R5 217 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 C3P1Q6ZMU1 363 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 LHFPL1Q86WI0 220 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 MEX3DQ86XN8 651 aaKnown RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 GUF1Q8N442 669 aaKnown RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 ZNF555Q8NEP9 628 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 OR4K17Q8NGC6 315 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 OR8K1Q8NGG5 319 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 PPTC7Q8NI37 304 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 BRI3BPQ8WY22 251 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 KIAA1191Q96A73 305 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms