RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TAS2R4Q9NYW5 299 aa18.46■□□□□ 0.55
C9orf3-222ENST00000496567 SSR3Q9UNL2 185 aa18.46■□□□□ 0.55
C9orf3-222ENST00000496567 FOXJ3Q9UPW0 622 aa18.46■□□□□ 0.55
C9orf3-222ENST00000496567 SPG11Q96JI7 2443 aa18.45■□□□□ 0.54
C9orf3-222ENST00000496567 TMEM210A6NLX4 147 aa18.45■□□□□ 0.54
C9orf3-222ENST00000496567 F12P00748 615 aaPredicted RBP18.45■□□□□ 0.54
C9orf3-222ENST00000496567 EFNA4P52798 201 aa18.45■□□□□ 0.54
C9orf3-222ENST00000496567 HSD17B12Q53GQ0 312 aa18.45■□□□□ 0.54
C9orf3-222ENST00000496567 ZNF529Q6P280 563 aa18.45■□□□□ 0.54
C9orf3-222ENST00000496567 GPR141Q7Z602 305 aa18.45■□□□□ 0.54
C9orf3-222ENST00000496567 DNAAF1Q8NEP3 725 aa18.45■□□□□ 0.54
C9orf3-222ENST00000496567 OR1M1Q8NGA1 313 aa18.45■□□□□ 0.54
C9orf3-222ENST00000496567 ITLN1Q8WWA0 313 aa18.45■□□□□ 0.54
C9orf3-222ENST00000496567 IGKV1-9A0A0C4DH69 117 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 ZNF732B4DXR9 585 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 PIN1P1O15428 100 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 MAGEB3O15480 346 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 NCR1O76036 304 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 IGFBP3P17936 291 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-222ENST00000496567 AZGP1P25311 298 aaKnown RBP18.44■□□□□ 0.54
C9orf3-222ENST00000496567 FGF9P31371 208 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-222ENST00000496567 GATA4P43694 442 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 GPM6AP51674 278 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 FAM76BQ5HYJ3 339 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 DMRTC1Q5HYR2 192 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 ASPHD2Q6ICH7 369 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 NPRL2Q8WTW4 380 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 ORAI1Q96D31 301 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 MBD6Q96DN6 1003 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 BORCS8Q96FH0 119 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 GSX2Q9BZM3 304 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 BARX1Q9HBU1 254 aaPredicted RBP18.44■□□□□ 0.54
C9orf3-222ENST00000496567 TCF7L1Q9HCS4 588 aa18.44■□□□□ 0.54
C9orf3-222ENST00000496567 EXOSC4Q9NPD3 245 aaKnown RBP18.44■□□□□ 0.54
C9orf3-222ENST00000496567 LOC100289279A0A1B0GTE1 492 aa18.43■□□□□ 0.54
C9orf3-222ENST00000496567 PTBP3O95758 552 aaKnown RBP18.43■□□□□ 0.54
C9orf3-222ENST00000496567 GADD45AP24522 165 aa18.43■□□□□ 0.54
C9orf3-222ENST00000496567 THBS2P35442 1172 aa18.43■□□□□ 0.54
C9orf3-222ENST00000496567 FAM27D1Q5T7N8 215 aa18.43■□□□□ 0.54
C9orf3-222ENST00000496567 GDPGP1Q6ZNW5 385 aa18.43■□□□□ 0.54
C9orf3-222ENST00000496567 CDH24Q86UP0 819 aa18.43■□□□□ 0.54
C9orf3-222ENST00000496567 TRMT10AQ8TBZ6 339 aaKnown RBP18.43■□□□□ 0.54
C9orf3-222ENST00000496567 ERGIC1Q969X5 290 aa18.43■□□□□ 0.54
C9orf3-222ENST00000496567 SLITRK2Q9H156 845 aa18.43■□□□□ 0.54
C9orf3-222ENST00000496567 OR51E2Q9H255 320 aa18.43■□□□□ 0.54
C9orf3-222ENST00000496567 TMEM138Q9NPI0 162 aa18.43■□□□□ 0.54
C9orf3-222ENST00000496567 ASH1LQ9NR48 2969 aaKnown RBP18.43■□□□□ 0.54
C9orf3-222ENST00000496567 GSTK1Q9Y2Q3 226 aa18.43■□□□□ 0.54
C9orf3-222ENST00000496567 FAM230AA0A1W2PPH8 454 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 PQLC2LA1A4F0 135 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 HPXP02790 462 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 GRPP07492 148 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 HCKP08631 526 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 SRMP19623 302 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 PTH2RP49190 550 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 RBP2P50120 134 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 ATP1B3P54709 279 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 ATP5J2P56134 94 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 DEFB113Q30KQ7 82 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 LHFPL2Q6ZUX7 228 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 ZNF573Q86YE8 665 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 CPNE2Q96FN4 548 aaPredicted RBP18.42■□□□□ 0.54
C9orf3-222ENST00000496567 CHCHD6Q9BRQ6 235 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 FGF23Q9GZV9 251 aaPredicted RBP18.42■□□□□ 0.54
C9orf3-222ENST00000496567 PPP1R3CQ9UQK1 317 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 TRAV8-7A0A075B6U6 113 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 LRP5LA4QPB2 252 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 NDUFS7O75251 213 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 CALRP27797 417 aaKnown RBP18.42■□□□□ 0.54
C9orf3-222ENST00000496567 BDKRB2P30411 391 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 MRPS11P82912 194 aaKnown RBP18.42■□□□□ 0.54
C9orf3-222ENST00000496567 ZNF154Q13106 437 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 OR51A2Q8NGJ7 313 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 FUNDC2Q9BWH2 189 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 PPIL3Q9H2H8 161 aaKnown RBP18.42■□□□□ 0.54
C9orf3-222ENST00000496567 FN3KRPQ9HA64 309 aa18.42■□□□□ 0.54
C9orf3-222ENST00000496567 TXNL4BQ9NX01 149 aaKnown RBP18.42■□□□□ 0.54
C9orf3-222ENST00000496567 IGHV1-69-2A0A0G2JMI3 117 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 IGHV3-64DA0A0J9YX35 117 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 MEGF11A6BM72 1044 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 IGHV4-39P01824 125 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 ALDOBP05062 364 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 DAOP14920 347 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 MTCP1P56278 107 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 SPRNQ5BIV9 151 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 PRAMEF6Q5VXH4 476 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 FOXB2Q5VYV0 432 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 C22orf42Q6IC83 251 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 WDR86Q86TI4 376 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 LRRC75A-AS1Q8N1F1 130 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 RDH5Q92781 318 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 PERPQ96FX8 193 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 OR51I2Q9H344 312 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 GCM1Q9NP62 436 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 DLL4Q9NR61 685 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 USF3Q68DE3 2245 aa18.41■□□□□ 0.54
C9orf3-222ENST00000496567 LOC100506127A0A0U1RQW1 187 aa18.4■□□□□ 0.54
C9orf3-222ENST00000496567 A6NLC8 198 aa18.4■□□□□ 0.54
C9orf3-222ENST00000496567 IFNL4K9M1U5 179 aa18.4■□□□□ 0.54
C9orf3-222ENST00000496567 AIREO43918 545 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms