RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ASCC1Q8N9N2 400 aaKnown RBP6.05□□□□□ -1.44
USP39-219ENST00000496047 CSNK2A3Q8NEV1 391 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 OR51T1Q8NGJ9 327 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 OR5L1Q8NGL2 311 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 OR8S1Q8NH09 359 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 GCDHQ92947 438 aaPredicted RBP6.05□□□□□ -1.44
USP39-219ENST00000496047 SNAPC3Q92966 411 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 SARAFQ96BY9 339 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 RAB3CQ96E17 227 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 FBXO17Q96EF6 278 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 GMPPAQ96IJ6 420 aaPredicted RBP6.05□□□□□ -1.44
USP39-219ENST00000496047 FAM210AQ96ND0 272 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 GAL3ST1Q99999 423 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 GON7Q9BXV9 100 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 HES7Q9BYE0 225 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 PRDM14Q9GZV8 571 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 GHITMQ9H3K2 345 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 PTPN13Q12923 2485 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 TMEM82A0PJX8 343 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 MEIS3P1A6NDR6 274 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 TMEM235A6NFC5 223 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 SERPINE3A8MV23 424 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.04□□□□□ -1.44
USP39-219ENST00000496047 GMDSO60547 372 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 LMX1BO60663 402 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 CA11O75493 328 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 NRASP01111 189 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 CD3DP04234 171 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 MELTFP08582 738 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 GIPP09681 153 aaPredicted RBP6.04□□□□□ -1.44
USP39-219ENST00000496047 GSTT2P0CG29 244 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 TMEM225BP0DP42 221 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 CD79AP11912 226 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 HIST1H1DP16402 221 aaKnown RBP6.04□□□□□ -1.44
USP39-219ENST00000496047 SERPINA2P20848 420 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 DNASE1P24855 282 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 MPGP29372 298 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 PTGFRP43088 359 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 OR3A4PP47883 348 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 GZMKP49863 264 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 RBP2P50120 134 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 TNFSF10P50591 281 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 MECP2P51608 486 aaKnown RBP6.04□□□□□ -1.44
USP39-219ENST00000496047 FUT6P51993 359 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 NKX2-5P52952 324 aaPredicted RBP6.04□□□□□ -1.44
USP39-219ENST00000496047 TAS2R46P59540 309 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 GMFBP60983 142 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 RAP2BP61225 183 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 ARF1P84077 181 aaKnown RBP6.04□□□□□ -1.44
USP39-219ENST00000496047 PSG4Q00888 419 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 TNK1Q13470 666 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 RSU1Q15404 277 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 FCN2Q15485 313 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 ZNF260Q3ZCT1 412 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 CDNFQ49AH0 187 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 SCGB2B2Q4G0G5 96 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 SLC22A6Q4U2R8 563 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 C4orf46Q504U0 113 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 PABPC1L2AQ5JQF8 200 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 TSPO2Q5TGU0 170 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 PLCXD3Q63HM9 321 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 ZNF626Q68DY1 528 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 OR2A2Q6IF42 318 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 LIN54Q6MZP7 749 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 PLXDC2Q6UX71 529 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 UNQ6126/PRO20091Q6UXV3 157 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 NCCRP1Q6ZVX7 275 aaPredicted RBP6.04□□□□□ -1.44
USP39-219ENST00000496047 TMPRSS7Q7RTY8 843 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 NAA40Q86UY6 237 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 VASH2Q86V25 355 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 LIX1LQ8IVB5 337 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 TUSC5Q8IXB3 177 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 CCDC36Q8IYA8 594 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 OR5AS1Q8N127 324 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 SPICQ8N5J4 248 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 ZDHHC22Q8N966 263 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 AKR7LQ8NHP1 331 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 FNDC9Q8TBE3 224 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 ZFAND1Q8TCF1 268 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 ZNF431Q8TF32 576 aaPredicted RBP6.04□□□□□ -1.44
USP39-219ENST00000496047 AQP3Q92482 292 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 APOBEC3DQ96AK3 386 aaPredicted RBP6.04□□□□□ -1.44
USP39-219ENST00000496047 SEH1LQ96EE3 360 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 FYTTD1Q96QD9 318 aaKnown RBP6.04□□□□□ -1.44
USP39-219ENST00000496047 HIST1H2AAQ96QV6 131 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 BEX2Q9BXY8 128 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 KRTAP9-2Q9BYQ4 174 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 WNT5BQ9H1J7 359 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 KCNK15Q9H427 330 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 ASCL3Q9NQ33 180 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 SLC2A8Q9NY64 477 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 MGAT4CQ9UBM8 478 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 EIF3KQ9UBQ5 218 aaKnown RBP6.04□□□□□ -1.44
USP39-219ENST00000496047 OTOGLQ3ZCN5 2332 aa6.04□□□□□ -1.44
USP39-219ENST00000496047 MEIKINA0A087WXM9 373 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 FAM230AA0A1W2PPH8 454 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 RAB27BO00194 218 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 AQP7O14520 342 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 RGS13O14921 159 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 ATP6V1G1O75348 118 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms