RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 CR1P17927 2039 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 TANC2Q9HCD6 1990 aa16.33■□□□□ 0.21
HDAC4-212ENST00000495497 hCG_1807616A0A1W2PRN6 198 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 LRRC30A6NM36 301 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 TMEM212A6NML5 194 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 IFNL4K9M1U5 179 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 MT-ND2P03891 347 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 IGHV4-31P0DP07 118 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 IRF2P14316 349 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 CDH15P55291 814 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 BTG1P62324 171 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 UBE2V2Q15819 145 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 ZNF181Q2M3W8 571 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 CCDC58Q4VC31 144 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 CLEC9AQ6UXN8 241 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 BIVMQ86UB2 503 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 CCDC54Q8NEL0 328 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 OR13C3Q8NGS6 347 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 RGP1Q92546 391 aaPredicted RBP16.33■□□□□ 0.2
HDAC4-212ENST00000495497 COMMD4Q9H0A8 199 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 DUSP21Q9H596 190 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 HHLA2Q9UM44 414 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 ERGIC3Q9Y282 383 aa16.33■□□□□ 0.2
HDAC4-212ENST00000495497 PNMA8CA0A1B0GUJ8 204 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 ANKRD61A6NGH8 418 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 OGG1O15527 345 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 ZNF12P17014 697 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 CD80P33681 288 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 WNT4P56705 351 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 LMO4P61968 165 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 ANK3Q12955 4377 aaKnown RBP16.32■□□□□ 0.2
HDAC4-212ENST00000495497 SCCPDHQ8NBX0 429 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 OR5A2Q8NGI9 324 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 TRMT10AQ8TBZ6 339 aaKnown RBP16.32■□□□□ 0.2
HDAC4-212ENST00000495497 HAVCR2Q8TDQ0 301 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 NPRL2Q8WTW4 380 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 GAL3ST1Q99999 423 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 CDCA4Q9BXL8 241 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 Q9H521 79 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 TRIM36Q9NQ86 728 aa16.32■□□□□ 0.2
HDAC4-212ENST00000495497 MED13LQ71F56 2210 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 PPIAL4EA0A075B759 164 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 TMEM210A6NLX4 147 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 PPIAL4DF5H284 164 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 RGS10O43665 173 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 PPIAL4FP0DN26 164 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 ZNF20P17024 532 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 EGR1P18146 543 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 GNG3P63215 75 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 IRF3Q14653 427 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 FAM76BQ5HYJ3 339 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 RBM48Q5RL73 367 aaKnown RBP16.31■□□□□ 0.2
HDAC4-212ENST00000495497 RNLSQ5VYX0 342 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 SFRP4Q6FHJ7 346 aaPredicted RBP16.31■□□□□ 0.2
HDAC4-212ENST00000495497 WDR82Q6UXN9 313 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 LRRC28Q86X40 367 aaPredicted RBP16.31■□□□□ 0.2
HDAC4-212ENST00000495497 C1orf87Q8N0U7 546 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 GCSAMQ8N6F7 178 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 DEFB108BQ8NET1 73 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 RPS4Y2Q8TD47 263 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 LRRC29Q8WV35 223 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 HPS1Q92902 700 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 OR5M11Q96RB7 305 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 CCDC90BQ9GZT6 254 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 TLNRD1Q9H1K6 362 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 OR51I2Q9H344 312 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 ZNF665Q9H7R5 613 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 TMEM165Q9HC07 324 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 PPIAL4AQ9Y536 164 aa16.31■□□□□ 0.2
HDAC4-212ENST00000495497 FAM230AA0A1W2PPH8 454 aa16.3■□□□□ 0.2
HDAC4-212ENST00000495497 FAM157AC9JC47 383 aa16.3■□□□□ 0.2
HDAC4-212ENST00000495497 RHBDL1O75783 438 aa16.3■□□□□ 0.2
HDAC4-212ENST00000495497 ZNF16P17020 682 aaPredicted RBP16.3■□□□□ 0.2
HDAC4-212ENST00000495497 SOX2P48431 317 aa16.3■□□□□ 0.2
HDAC4-212ENST00000495497 GMFBP60983 142 aa16.3■□□□□ 0.2
HDAC4-212ENST00000495497 DMKNQ6E0U4 476 aaPredicted RBP16.3■□□□□ 0.2
HDAC4-212ENST00000495497 OR13C5Q8NGS8 318 aa16.3■□□□□ 0.2
HDAC4-212ENST00000495497 TSEN15Q8WW01 171 aaKnown RBP16.3■□□□□ 0.2
HDAC4-212ENST00000495497 MSI2Q96DH6 328 aaKnown RBP16.3■□□□□ 0.2
HDAC4-212ENST00000495497 SMIM19Q96E16 107 aa16.3■□□□□ 0.2
HDAC4-212ENST00000495497 MND1Q9BWT6 205 aa16.3■□□□□ 0.2
HDAC4-212ENST00000495497 CHST5Q9GZS9 411 aa16.3■□□□□ 0.2
HDAC4-212ENST00000495497 DHDHQ9UQ10 334 aa16.3■□□□□ 0.2
HDAC4-212ENST00000495497 LSM2Q9Y333 95 aaKnown RBP16.3■□□□□ 0.2
HDAC4-212ENST00000495497 IGKV1-9A0A0C4DH69 117 aa16.29■□□□□ 0.2
HDAC4-212ENST00000495497 PQLC2LA1A4F0 135 aa16.29■□□□□ 0.2
HDAC4-212ENST00000495497 OR5B21A6NL26 309 aa16.29■□□□□ 0.2
HDAC4-212ENST00000495497 LHBP01229 141 aa16.29■□□□□ 0.2
HDAC4-212ENST00000495497 IGHV2-5P01817 119 aa16.29■□□□□ 0.2
HDAC4-212ENST00000495497 EEF1B2P24534 225 aaKnown RBP16.29■□□□□ 0.2
HDAC4-212ENST00000495497 MDH2P40926 338 aaKnown RBP16.29■□□□□ 0.2
HDAC4-212ENST00000495497 MAP2K4P45985 399 aa16.29■□□□□ 0.2
HDAC4-212ENST00000495497 CYB5R2Q6BCY4 276 aa16.29■□□□□ 0.2
HDAC4-212ENST00000495497 GHSRQ92847 366 aa16.29■□□□□ 0.2
HDAC4-212ENST00000495497 C10orf35Q96D05 121 aa16.29■□□□□ 0.2
HDAC4-212ENST00000495497 SEH1LQ96EE3 360 aa16.29■□□□□ 0.2
HDAC4-212ENST00000495497 TMEM246Q9BRR3 403 aa16.29■□□□□ 0.2
HDAC4-212ENST00000495497 RASSF4Q9H2L5 321 aa16.29■□□□□ 0.2
HDAC4-212ENST00000495497 IGKV1-27A0A075B6S5 117 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 IGHV3OR15-7A0A075B7D8 119 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms