RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 HCP5Q6MZN7 132 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 CGB2Q6NT52 195 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 C8orf82Q6P1X6 216 aaPredicted RBP11.57□□□□□ -0.56
VARS-228ENST00000495010 HACD2Q6Y1H2 254 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 MKXQ8IYA7 352 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 ZNRF1Q8ND25 227 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 OR5P3Q8WZ94 311 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 PIGCQ92535 297 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 DDOQ99489 341 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 ABCB10Q9NRK6 738 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 TBC1D23Q9NUY8 699 aa11.57□□□□□ -0.56
VARS-228ENST00000495010 CCDC22O60826 627 aa11.56□□□□□ -0.56
VARS-228ENST00000495010 FABP3P05413 133 aa11.56□□□□□ -0.56
VARS-228ENST00000495010 HABP2Q14520 560 aaPredicted RBP11.56□□□□□ -0.56
VARS-228ENST00000495010 KLHL12Q53G59 568 aa11.56□□□□□ -0.56
VARS-228ENST00000495010 DEFB121Q5J5C9 76 aa11.56□□□□□ -0.56
VARS-228ENST00000495010 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.56□□□□□ -0.56
VARS-228ENST00000495010 OR6N2Q8NGY6 317 aa11.56□□□□□ -0.56
VARS-228ENST00000495010 CITED2Q99967 270 aaPredicted RBP11.56□□□□□ -0.56
VARS-228ENST00000495010 PRSS22Q9GZN4 317 aa11.56□□□□□ -0.56
VARS-228ENST00000495010 ZNF702PQ9H963 129 aa11.56□□□□□ -0.56
VARS-228ENST00000495010 SPAG4Q9NPE6 437 aa11.56□□□□□ -0.56
VARS-228ENST00000495010 ABCD2Q9UBJ2 740 aa11.56□□□□□ -0.56
VARS-228ENST00000495010 CST4P01036 141 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 IFNGP01579 166 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 H2BFMP0C1H6 154 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 IGLL1P15814 213 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 SPI1P17947 270 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 COX7A1P24310 79 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 CRMP1Q14194 572 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 PLA1AQ53H76 456 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 ERI1Q8IV48 349 aaKnown RBP11.55□□□□□ -0.56
VARS-228ENST00000495010 ZDHHC23Q8IYP9 409 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 ZNF671Q8TAW3 534 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 RNF133Q8WVZ7 376 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 AJUBAQ96IF1 538 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 OR5M11Q96RB7 305 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 INTS14Q96SY0 518 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 ABHD6Q9BV23 337 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 GORASP2Q9H8Y8 452 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 C19orf12Q9NSK7 152 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 SERTAD4Q9NUC0 356 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 PITPNC1Q9UKF7 332 aa11.55□□□□□ -0.56
VARS-228ENST00000495010 IGKV1D-17A0A075B6S4 117 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 PF4V1P10720 104 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 PSG2P11465 335 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 GPM6AP51674 278 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 SLC25A1P53007 311 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 ERVFRD-1P60508 538 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 RPL31P62899 125 aaKnown RBP11.54□□□□□ -0.56
VARS-228ENST00000495010 CNN3Q15417 329 aaKnown RBP11.54□□□□□ -0.56
VARS-228ENST00000495010 FAM76BQ5HYJ3 339 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 SAMD4BQ5PRF9 694 aaKnown RBP11.54□□□□□ -0.56
VARS-228ENST00000495010 SHFQ7M4L6 423 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 PRSS45Q7RTY3 260 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 LINC00471Q8N535 108 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 RNF148Q8N7C7 305 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 OR5K1Q8NHB7 308 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 FAM81AQ8TBF8 368 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 TSSK6Q9BXA6 273 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 CDCA4Q9BXL8 241 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 C1orf21Q9H246 121 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 YY1AP1Q9H869 796 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 VIPAS39Q9H9C1 493 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 IL20Q9NYY1 176 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 USE1Q9NZ43 259 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 ZNF319Q9P2F9 582 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 MAGEL2Q9UJ55 1249 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 BAIAP2Q9UQB8 552 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 TCF19Q9Y242 345 aa11.54□□□□□ -0.56
VARS-228ENST00000495010 NOTCH3Q9UM47 2321 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 NBEAL2Q6ZNJ1 2754 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 A0A1W2PRX2 142 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 RIIAD1A6NNX1 92 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 SLC1A7O00341 560 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 RHBDL1O75783 438 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 KRT36O76013 467 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 SEMG1P04279 462 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 ALDOBP05062 364 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 VSIG8P0DPA2 414 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 CLUP10909 449 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 RAB13P51153 203 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 RASSF6Q6ZTQ3 369 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 THAP5Q7Z6K1 395 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 Q8N2B8 174 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 OR9Q2Q8NGE9 314 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 PIFOQ8TCI5 191 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 RPS4Y2Q8TD47 263 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 OTULINQ96BN8 352 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 CMTM5Q96DZ9 223 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 SDSLQ96GA7 329 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 NSMCE2Q96MF7 247 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 NMNAT2Q9BZQ4 307 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 LRP12Q9Y561 859 aa11.53□□□□□ -0.56
VARS-228ENST00000495010 VGLL3A8MV65 326 aa11.52□□□□□ -0.57
VARS-228ENST00000495010 ZNF732B4DXR9 585 aa11.52□□□□□ -0.57
VARS-228ENST00000495010 H3BUI4 141 aa11.52□□□□□ -0.57
VARS-228ENST00000495010 TNFRSF11BO00300 401 aa11.52□□□□□ -0.57
VARS-228ENST00000495010 PF4P02776 101 aa11.52□□□□□ -0.57
VARS-228ENST00000495010 ZNF3P17036 446 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms