RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 UBE2E1P51965 193 aa19.03■□□□□ 0.64
COL27A1-208ENST00000494780 CAV3P56539 151 aa19.03■□□□□ 0.64
COL27A1-208ENST00000494780 MS4A2Q01362 244 aa19.03■□□□□ 0.64
COL27A1-208ENST00000494780 KLRD1Q13241 179 aa19.03■□□□□ 0.64
COL27A1-208ENST00000494780 ZDHHC23Q8IYP9 409 aa19.03■□□□□ 0.64
COL27A1-208ENST00000494780 PAPD5Q8NDF8 572 aaKnown RBP19.03■□□□□ 0.64
COL27A1-208ENST00000494780 HPSE2Q8WWQ2 592 aa19.03■□□□□ 0.64
COL27A1-208ENST00000494780 HIST1H2AAQ96QV6 131 aa19.03■□□□□ 0.64
COL27A1-208ENST00000494780 FGF23Q9GZV9 251 aaPredicted RBP19.03■□□□□ 0.64
COL27A1-208ENST00000494780 METTL8Q9H825 291 aaKnown RBP19.03■□□□□ 0.64
COL27A1-208ENST00000494780 NLKQ9UBE8 527 aa19.03■□□□□ 0.64
COL27A1-208ENST00000494780 A0A0G2JK05 382 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 ZNF816-ZNF321PA0A0X1KG74 233 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 A0A1W2PRD5 423 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 A0A1W2PRF3 423 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 A0A1W2PRM7 423 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 MEIOCA2RUB1 952 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 SELENOFO60613 162 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 ACAA1P09110 424 aaPredicted RBP19.02■□□□□ 0.64
COL27A1-208ENST00000494780 RAP2AP10114 183 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 SAA4P35542 130 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 DLX1P56177 255 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 PSMA6P60900 246 aaKnown RBP19.02■□□□□ 0.64
COL27A1-208ENST00000494780 GNGT1P63211 74 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 ACSM1Q08AH1 577 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 PLBD1Q6P4A8 553 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 OR8B12Q8NGG6 310 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 LYZL4Q96KX0 146 aa19.02■□□□□ 0.64
COL27A1-208ENST00000494780 A0A1W2PQ09 198 aa19.01■□□□□ 0.63
COL27A1-208ENST00000494780 OR2AT4A6NND4 320 aa19.01■□□□□ 0.63
COL27A1-208ENST00000494780 PRODHO43272 600 aa19.01■□□□□ 0.63
COL27A1-208ENST00000494780 NDUFB7P17568 137 aa19.01■□□□□ 0.63
COL27A1-208ENST00000494780 BLMHQ13867 455 aa19.01■□□□□ 0.63
COL27A1-208ENST00000494780 KRT74Q7RTS7 529 aa19.01■□□□□ 0.63
COL27A1-208ENST00000494780 ITFG2Q969R8 447 aa19.01■□□□□ 0.63
COL27A1-208ENST00000494780 NSL1Q96IY1 281 aa19.01■□□□□ 0.63
COL27A1-208ENST00000494780 TSPAN15O95858 294 aa19■□□□□ 0.63
COL27A1-208ENST00000494780 CST1P01037 141 aa19■□□□□ 0.63
COL27A1-208ENST00000494780 TFF1P04155 84 aa19■□□□□ 0.63
COL27A1-208ENST00000494780 GLRA1P23415 457 aa19■□□□□ 0.63
COL27A1-208ENST00000494780 POU1F1P28069 291 aa19■□□□□ 0.63
COL27A1-208ENST00000494780 GINS1Q14691 196 aa19■□□□□ 0.63
COL27A1-208ENST00000494780 C2orf68Q2NKX9 166 aa19■□□□□ 0.63
COL27A1-208ENST00000494780 PNKDQ8N490 385 aa19■□□□□ 0.63
COL27A1-208ENST00000494780 BEND2Q8NDZ0 799 aa19■□□□□ 0.63
COL27A1-208ENST00000494780 DUS3LQ96G46 650 aaKnown RBP19■□□□□ 0.63
COL27A1-208ENST00000494780 ANKRD61A6NGH8 418 aa18.99■□□□□ 0.63
COL27A1-208ENST00000494780 HMGN1P05114 100 aa18.99■□□□□ 0.63
COL27A1-208ENST00000494780 GPM6AP51674 278 aa18.99■□□□□ 0.63
COL27A1-208ENST00000494780 EGR3Q06889 387 aa18.99■□□□□ 0.63
COL27A1-208ENST00000494780 SLC35D3Q5M8T2 416 aa18.99■□□□□ 0.63
COL27A1-208ENST00000494780 FAM81AQ8TBF8 368 aa18.99■□□□□ 0.63
COL27A1-208ENST00000494780 ASB9Q96DX5 294 aa18.99■□□□□ 0.63
COL27A1-208ENST00000494780 LRGUKQ96M69 825 aa18.99■□□□□ 0.63
COL27A1-208ENST00000494780 CHID1Q9BWS9 393 aa18.99■□□□□ 0.63
COL27A1-208ENST00000494780 KLHDC2Q9Y2U9 406 aa18.99■□□□□ 0.63
COL27A1-208ENST00000494780 LRP12Q9Y561 859 aa18.99■□□□□ 0.63
COL27A1-208ENST00000494780 IGKV1D-17A0A075B6S4 117 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 TRBV23-1A0A0A0MS06 115 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 ACOD1A6NK06 481 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 RHBDL1O75783 438 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 ALOX5APP20292 161 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 MAP2K3P46734 347 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 GABRA2P47869 451 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 GYS2P54840 703 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 GNG3P63215 75 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 SLC35E4Q6ICL7 350 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 KRT77Q7Z794 578 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 CPOQ8IVL8 374 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 OR5D13Q8NGL4 314 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 PPA2Q9H2U2 334 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 OR51I2Q9H344 312 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 FBLN5Q9UBX5 448 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 LAMP5Q9UJQ1 280 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 ZNF222Q9UK12 451 aa18.98■□□□□ 0.63
COL27A1-208ENST00000494780 SF3B6Q9Y3B4 125 aaKnown RBP18.98■□□□□ 0.63
COL27A1-208ENST00000494780 A0A0U1RQV5 110 aa18.97■□□□□ 0.63
COL27A1-208ENST00000494780 PSG2P11465 335 aa18.97■□□□□ 0.63
COL27A1-208ENST00000494780 OSMP13725 252 aa18.97■□□□□ 0.63
COL27A1-208ENST00000494780 CDK5Q00535 292 aa18.97■□□□□ 0.63
COL27A1-208ENST00000494780 CEACAM21Q3KPI0 293 aa18.97■□□□□ 0.63
COL27A1-208ENST00000494780 TMEM179BQ7Z7N9 219 aa18.97■□□□□ 0.63
COL27A1-208ENST00000494780 ZNF671Q8TAW3 534 aa18.97■□□□□ 0.63
COL27A1-208ENST00000494780 FAM110DQ8TAY7 271 aaPredicted RBP18.97■□□□□ 0.63
COL27A1-208ENST00000494780 TAS2R1Q9NYW7 299 aa18.97■□□□□ 0.63
COL27A1-208ENST00000494780 MAB21L2Q9Y586 359 aa18.97■□□□□ 0.63
COL27A1-208ENST00000494780 ZNF732B4DXR9 585 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 H0YAE9 185 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 GNGT2O14610 69 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 ATP6V1B1P15313 513 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 GABRA5P31644 462 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 RPS7P62081 194 aaKnown RBP18.96■□□□□ 0.63
COL27A1-208ENST00000494780 HCP5Q6MZN7 132 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 DEGS2Q6QHC5 323 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 ADGRG5Q8IZF4 528 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 ZNRF1Q8ND25 227 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 TMEM185AQ8NFB2 350 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 OR5A2Q8NGI9 324 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 SDSLQ96GA7 329 aa18.96■□□□□ 0.63
COL27A1-208ENST00000494780 FAM234AQ9H0X4 552 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms