RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 DNAJB11Q9UBS4 358 aa27.54■■■□□ 2
CBX4-203ENST00000494546 DUX4Q9UBX2 424 aa27.54■■■□□ 2
CBX4-203ENST00000494546 OR52A1Q9UKL2 312 aa27.54■■■□□ 2
CBX4-203ENST00000494546 ORC6Q9Y5N6 252 aa27.54■■■□□ 2
CBX4-203ENST00000494546 SOX21Q9Y651 276 aaPredicted RBP27.54■■■□□ 2
CBX4-203ENST00000494546 ZNF732B4DXR9 585 aa27.53■■■□□ 2
CBX4-203ENST00000494546 PLATP00750 562 aa27.53■■■□□ 2
CBX4-203ENST00000494546 LIPFP07098 398 aa27.53■■■□□ 2
CBX4-203ENST00000494546 CDC42P60953 191 aa27.53■■■□□ 2
CBX4-203ENST00000494546 UBA52P62987 128 aaKnown RBP27.53■■■□□ 2
CBX4-203ENST00000494546 GNG3P63215 75 aa27.53■■■□□ 2
CBX4-203ENST00000494546 TUSC1Q2TAM9 212 aa27.53■■■□□ 2
CBX4-203ENST00000494546 CEACAM21Q3KPI0 293 aa27.53■■■□□ 2
CBX4-203ENST00000494546 ZFP1Q6P2D0 407 aa27.53■■■□□ 2
CBX4-203ENST00000494546 BTN2A1Q7KYR7 527 aa27.53■■■□□ 2
CBX4-203ENST00000494546 SLC36A1Q7Z2H8 476 aa27.53■■■□□ 2
CBX4-203ENST00000494546 PNLDC1Q8NA58 520 aaKnown RBP27.53■■■□□ 2
CBX4-203ENST00000494546 OR5T2Q8NGG2 359 aa27.53■■■□□ 2
CBX4-203ENST00000494546 GCDHQ92947 438 aaPredicted RBP27.53■■■□□ 2
CBX4-203ENST00000494546 ITFG2Q969R8 447 aa27.53■■■□□ 2
CBX4-203ENST00000494546 C12orf43Q96C57 262 aaKnown RBP27.53■■■□□ 2
CBX4-203ENST00000494546 DUX5Q96PT3 197 aa27.53■■■□□ 2
CBX4-203ENST00000494546 SNTG1Q9NSN8 517 aa27.53■■■□□ 2
CBX4-203ENST00000494546 HAX1O00165 279 aa27.52■■■□□ 2
CBX4-203ENST00000494546 EI24O14681 340 aa27.52■■■□□ 2
CBX4-203ENST00000494546 AKR7A2O43488 359 aa27.52■■■□□ 2
CBX4-203ENST00000494546 MTRF1O75570 445 aaKnown RBP27.52■■■□□ 2
CBX4-203ENST00000494546 RPP14O95059 124 aaKnown RBP27.52■■■□□ 2
CBX4-203ENST00000494546 ATP6V1E1P36543 226 aa27.52■■■□□ 2
CBX4-203ENST00000494546 KRT74Q7RTS7 529 aa27.52■■■□□ 2
CBX4-203ENST00000494546 FGFRL1Q8N441 504 aa27.52■■■□□ 2
CBX4-203ENST00000494546 FAM216BQ8N7L0 139 aa27.52■■■□□ 2
CBX4-203ENST00000494546 YIPF7Q8N8F6 280 aa27.52■■■□□ 2
CBX4-203ENST00000494546 ENPP5Q9UJA9 477 aa27.52■■■□□ 2
CBX4-203ENST00000494546 SNX5Q9Y5X3 404 aa27.52■■■□□ 2
CBX4-203ENST00000494546 ZNF879B4DU55 563 aa27.51■■□□□ 1.99
CBX4-203ENST00000494546 DHRS3O75911 302 aa27.51■■□□□ 1.99
CBX4-203ENST00000494546 ALPLP05186 524 aa27.51■■□□□ 1.99
CBX4-203ENST00000494546 KRT8P05787 483 aa27.51■■□□□ 1.99
CBX4-203ENST00000494546 SFTPBP07988 381 aa27.51■■□□□ 1.99
CBX4-203ENST00000494546 MTNR1AP48039 350 aa27.51■■□□□ 1.99
CBX4-203ENST00000494546 BAMBIQ13145 260 aa27.51■■□□□ 1.99
CBX4-203ENST00000494546 ZBTB37Q5TC79 503 aa27.51■■□□□ 1.99
CBX4-203ENST00000494546 PLCXD3Q63HM9 321 aa27.51■■□□□ 1.99
CBX4-203ENST00000494546 ELMOD2Q8IZ81 293 aa27.51■■□□□ 1.99
CBX4-203ENST00000494546 OR10H4Q8NGA5 316 aa27.51■■□□□ 1.99
CBX4-203ENST00000494546 EME1Q96AY2 570 aa27.51■■□□□ 1.99
CBX4-203ENST00000494546 IMPAD1Q9NX62 359 aa27.51■■□□□ 1.99
CBX4-203ENST00000494546 A0A1W2PQL4 384 aaPredicted RBP27.5■■□□□ 1.99
CBX4-203ENST00000494546 TOX4O94842 621 aa27.5■■□□□ 1.99
CBX4-203ENST00000494546 ECDO95905 644 aaPredicted RBP27.5■■□□□ 1.99
CBX4-203ENST00000494546 OR2T7P0C7T2 308 aa27.5■■□□□ 1.99
CBX4-203ENST00000494546 BRD3OSQ6XYD6 125 aa27.5■■□□□ 1.99
CBX4-203ENST00000494546 C9orf139Q6ZV77 190 aa27.5■■□□□ 1.99
CBX4-203ENST00000494546 OR2T27Q8NH04 317 aa27.5■■□□□ 1.99
CBX4-203ENST00000494546 RFKQ969G6 155 aa27.5■■□□□ 1.99
CBX4-203ENST00000494546 RAB3IPQ96QF0 476 aaPredicted RBP27.5■■□□□ 1.99
CBX4-203ENST00000494546 OR51I2Q9H344 312 aa27.5■■□□□ 1.99
CBX4-203ENST00000494546 DNAJC9-AS1A6NH13 148 aa27.49■■□□□ 1.99
CBX4-203ENST00000494546 RHBDL1O75783 438 aa27.49■■□□□ 1.99
CBX4-203ENST00000494546 IKZF1Q13422 519 aa27.49■■□□□ 1.99
CBX4-203ENST00000494546 ZIK1Q3SY52 487 aaPredicted RBP27.49■■□□□ 1.99
CBX4-203ENST00000494546 GPR157Q5UAW9 335 aa27.49■■□□□ 1.99
CBX4-203ENST00000494546 STUMQ69YW2 141 aa27.49■■□□□ 1.99
CBX4-203ENST00000494546 OR5A2Q8NGI9 324 aa27.49■■□□□ 1.99
CBX4-203ENST00000494546 UBE2FQ969M7 185 aa27.49■■□□□ 1.99
CBX4-203ENST00000494546 USE1Q9NZ43 259 aa27.49■■□□□ 1.99
CBX4-203ENST00000494546 SLC22A13Q9Y226 551 aa27.49■■□□□ 1.99
CBX4-203ENST00000494546 OR5B21A6NL26 309 aa27.48■■□□□ 1.99
CBX4-203ENST00000494546 P2RY10O00398 339 aa27.48■■□□□ 1.99
CBX4-203ENST00000494546 EBAG9O00559 213 aa27.48■■□□□ 1.99
CBX4-203ENST00000494546 NDUFB3O43676 98 aa27.48■■□□□ 1.99
CBX4-203ENST00000494546 NRASP01111 189 aa27.48■■□□□ 1.99
CBX4-203ENST00000494546 AMY2BP19961 511 aa27.48■■□□□ 1.99
CBX4-203ENST00000494546 METTL11BQ5VVY1 283 aa27.48■■□□□ 1.99
CBX4-203ENST00000494546 WDFY2Q96P53 400 aa27.48■■□□□ 1.99
CBX4-203ENST00000494546 RPUSD1Q9UJJ7 312 aaKnown RBP27.48■■□□□ 1.99
CBX4-203ENST00000494546 TMEM89A2RUT3 159 aa27.47■■□□□ 1.99
CBX4-203ENST00000494546 NKX6-3A6NJ46 265 aa27.47■■□□□ 1.99
CBX4-203ENST00000494546 GLRA1P23415 457 aa27.47■■□□□ 1.99
CBX4-203ENST00000494546 ALDH3A2P51648 485 aa27.47■■□□□ 1.99
CBX4-203ENST00000494546 ARF6P62330 175 aa27.47■■□□□ 1.99
CBX4-203ENST00000494546 TMED1Q13445 227 aa27.47■■□□□ 1.99
CBX4-203ENST00000494546 C11orf91Q3C1V1 193 aa27.47■■□□□ 1.99
CBX4-203ENST00000494546 ZNF684Q5T5D7 378 aa27.47■■□□□ 1.99
CBX4-203ENST00000494546 C10orf67Q8IYJ2 551 aa27.47■■□□□ 1.99
CBX4-203ENST00000494546 TBX15Q96SF7 602 aa27.47■■□□□ 1.99
CBX4-203ENST00000494546 V9GYS6 101 aa27.47■■□□□ 1.99
CBX4-203ENST00000494546 A0A1B0GTI1 187 aa27.46■■□□□ 1.99
CBX4-203ENST00000494546 METTL15A6NJ78 407 aa27.46■■□□□ 1.99
CBX4-203ENST00000494546 TFF1P04155 84 aa27.46■■□□□ 1.99
CBX4-203ENST00000494546 MMP9P14780 707 aa27.46■■□□□ 1.99
CBX4-203ENST00000494546 PRTN3P24158 256 aa27.46■■□□□ 1.99
CBX4-203ENST00000494546 ODF4Q2M2E3 257 aa27.46■■□□□ 1.99
CBX4-203ENST00000494546 LRRC10Q5BKY1 277 aa27.46■■□□□ 1.99
CBX4-203ENST00000494546 ATPAF1Q5TC12 328 aaPredicted RBP27.46■■□□□ 1.99
CBX4-203ENST00000494546 HAGHLQ6PII5 290 aaPredicted RBP27.46■■□□□ 1.99
CBX4-203ENST00000494546 CBR4Q8N4T8 237 aa27.46■■□□□ 1.99
CBX4-203ENST00000494546 ZNF671Q8TAW3 534 aa27.46■■□□□ 1.99
CBX4-203ENST00000494546 TRUB1Q8WWH5 349 aaKnown RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms