RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 MICAQ29983 383 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 CEP78Q5JTW2 689 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 ATPAF1Q5TC12 328 aaPredicted RBP10.32□□□□□ -0.76
SKA1-205ENST00000494518 C16orf89Q6UX73 402 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.32□□□□□ -0.76
SKA1-205ENST00000494518 TIGD4Q8IY51 512 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 ZDHHC23Q8IYP9 409 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 FAM185AQ8N0U4 392 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 LYG1Q8N1E2 194 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 TMEM185AQ8NFB2 350 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 OR10G2Q8NGC3 310 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 OR10Z1Q8NGY1 313 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 ANGPTL6Q8NI99 470 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 C8orf46Q8TAG6 207 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 TEX47Q8TBZ9 253 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 NPRL2Q8WTW4 380 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 THEM6Q8WUY1 208 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 SSX3Q99909 188 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 DGCR6LQ9BY27 220 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 REEP1Q9H902 201 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 MED4Q9NPJ6 270 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 CMC2Q9NRP2 79 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 NLKQ9UBE8 527 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 DSCAML1Q8TD84 2053 aa10.32□□□□□ -0.76
SKA1-205ENST00000494518 TCRBV5S2A0A599 114 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 TMEM210A6NLX4 147 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 OR2AT4A6NND4 320 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 H0YAE9 185 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 SIGLEC5O15389 551 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 LYNP07948 512 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 UBE2E1P51965 193 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 CAPZA1P52907 286 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 BLVRAP53004 296 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 PRR20EP86478 221 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 PRR20CP86479 221 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 PRR20DP86480 221 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 PRR20BP86481 221 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 PRR20AP86496 221 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 OR2T5Q6IEZ7 315 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 HCP5Q6MZN7 132 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 PLBD1Q6P4A8 553 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 Q6ZTK2 550 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 SHFQ7M4L6 423 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 CPLX4Q7Z7G2 160 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 FTMTQ8N4E7 242 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 ZNRF1Q8ND25 227 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 OR8B12Q8NGG6 310 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 OR2T29Q8NH02 315 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 OR5R1Q8NH85 324 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 FAM81AQ8TBF8 368 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 METTL8Q9H825 291 aaKnown RBP10.31□□□□□ -0.76
SKA1-205ENST00000494518 YY1AP1Q9H869 796 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 ACTR3BQ9P1U1 418 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 MPC1Q9Y5U8 109 aa10.31□□□□□ -0.76
SKA1-205ENST00000494518 IGKV1D-17A0A075B6S4 117 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 ZNF732B4DXR9 585 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 M0R1W7 72 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 PSMD9O00233 223 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 CST4P01036 141 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 ACAA1P09110 424 aaPredicted RBP10.3□□□□□ -0.76
SKA1-205ENST00000494518 PSG2P11465 335 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 DCTDP32321 178 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 HCCSP53701 268 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 BLMHQ13867 455 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 HERPUD1Q15011 391 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 PLA1AQ53H76 456 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 NCR3LG1Q68D85 454 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 BATF2Q8N1L9 274 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 KLHDC1Q8N7A1 406 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 BEND2Q8NDZ0 799 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 OR51G2Q8NGK0 314 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 MED30Q96HR3 178 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 ZNF488Q96MN9 340 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 TTTY10Q9BZA0 68 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 DNTTIP1Q9H147 329 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 RGCCQ9H4X1 137 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 C19orf12Q9NSK7 152 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 MAB21L2Q9Y586 359 aa10.3□□□□□ -0.76
SKA1-205ENST00000494518 VSIG10L2P0DP72 767 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 COX7A1P24310 79 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 CEBPDP49716 269 aaPredicted RBP10.29□□□□□ -0.76
SKA1-205ENST00000494518 GYS2P54840 703 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 CAV3P56539 151 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 ERVFRD-1P60508 538 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 PSMA6P60900 246 aaKnown RBP10.29□□□□□ -0.76
SKA1-205ENST00000494518 RPS7P62081 194 aaKnown RBP10.29□□□□□ -0.76
SKA1-205ENST00000494518 ACSM1Q08AH1 577 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 SNCBQ16143 134 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 LRRC75BQ2VPJ9 315 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 BEAN1Q3B7T3 259 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 COMMD2Q86X83 199 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 MKXQ8IYA7 352 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 BBS1Q8NFJ9 593 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 OR4C13Q8NGP0 309 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 OTOSQ8NHW6 89 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 AJUBAQ96IF1 538 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 HIST1H2AAQ96QV6 131 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 FEVQ99581 238 aa10.29□□□□□ -0.76
SKA1-205ENST00000494518 NKX3-1Q99801 234 aaPredicted RBP10.29□□□□□ -0.76
SKA1-205ENST00000494518 MAGIXQ9H6Y5 334 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms