RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 OR1S1Q8NH92 325 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 PDCD10Q9BUL8 212 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 ULBP2Q9BZM5 246 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 LDAHQ9H6V9 325 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 GLRX2Q9NS18 164 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 KLK13Q9UKR3 277 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 TRAV14DV4A0A0A6YYC5 116 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 A0A0A6YYH2 397 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 PQLC2LA1A4F0 135 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 A6NJ64 397 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 SULT1C2O00338 296 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 HLA-AP01891 365 aaKnown RBP12.1□□□□□ -0.47
VCP-207ENST00000493886 ABOP16442 354 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 RAB6AP20340 208 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 TAS2R19P59542 299 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 ACTBP60709 375 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 ACTG1P63261 375 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 SSBP1Q04837 148 aaKnown RBP12.1□□□□□ -0.47
VCP-207ENST00000493886 PMPCAQ10713 525 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 WIPI1Q5MNZ9 446 aaPredicted RBP12.1□□□□□ -0.47
VCP-207ENST00000493886 ATPAF1Q5TC12 328 aaPredicted RBP12.1□□□□□ -0.47
VCP-207ENST00000493886 MYO7BQ6PIF6 2116 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 CHST4Q8NCG5 386 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 GJC3Q8NFK1 279 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 ZNF775Q96BV0 537 aaPredicted RBP12.1□□□□□ -0.47
VCP-207ENST00000493886 FAM71F1Q96KD3 344 aaPredicted RBP12.1□□□□□ -0.47
VCP-207ENST00000493886 SPACA5Q96QH8 159 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 SH3BGRL2Q9UJC5 107 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 KNTC1P50748 2209 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 PINLYPA6NC86 204 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 HMSDA8MTL9 139 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 ZNF736B4DX44 427 aaPredicted RBP12.09□□□□□ -0.47
VCP-207ENST00000493886 APOC3P02656 99 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 CTSSP25774 331 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 ELP2Q6IA86 826 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 ZNF546Q86UE3 836 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 C20orf196Q8IYI0 205 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 LRRC18Q8N456 261 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 NUDCD2Q8WVJ2 157 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 ZNF75AQ96N20 296 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 SLC6A7Q99884 636 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 GPR87Q9BY21 358 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 WDR13Q9H1Z4 485 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 OR51M1Q9H341 326 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 RAB22AQ9UL26 194 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 SLC5A6Q9Y289 635 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 PLEKHA6Q9Y2H5 1048 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 C21orf140B9A014 251 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 H7C2Y5 167 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 PRF1P14222 555 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 CCL1P22362 96 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 GDF1P27539 372 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 DHRS2Q13268 280 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 GFOD2Q3B7J2 385 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 CDNFQ49AH0 187 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 PDZD9Q8IXQ8 264 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 CASTOR1Q8WTX7 329 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 LRFN1Q9P244 771 aa12.09□□□□□ -0.47
VCP-207ENST00000493886 CXCL13O43927 109 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 ITGB2P05107 769 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 ERCC1P07992 297 aaPredicted RBP12.08□□□□□ -0.48
VCP-207ENST00000493886 CNR1P21554 472 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 EIF2S3P41091 472 aaKnown RBP12.08□□□□□ -0.48
VCP-207ENST00000493886 ZNF84P51523 738 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 EIF3IQ13347 325 aaKnown RBP12.08□□□□□ -0.48
VCP-207ENST00000493886 SPINK14Q6IE38 97 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 ATRAIDQ6UW56 229 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 DHRS13Q6UX07 377 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 DOK3Q7L591 496 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 NARS2Q96I59 477 aaKnown RBP12.08□□□□□ -0.48
VCP-207ENST00000493886 MRPS18CQ9Y3D5 142 aaKnown RBP12.08□□□□□ -0.48
VCP-207ENST00000493886 FLVCR1Q9Y5Y0 555 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 FREM2Q5SZK8 3169 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 OR5H15A6NDH6 313 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 METTL21EPA6NDL7 271 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 ZNF93P35789 620 aaPredicted RBP12.08□□□□□ -0.48
VCP-207ENST00000493886 LUMP51884 338 aaPredicted RBP12.08□□□□□ -0.48
VCP-207ENST00000493886 PAQR4Q8N4S7 273 aaPredicted RBP12.08□□□□□ -0.48
VCP-207ENST00000493886 OR2V1Q8NHB1 315 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 ZNF837Q96EG3 531 aaPredicted RBP12.08□□□□□ -0.48
VCP-207ENST00000493886 PGAM5Q96HS1 289 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 ADGRG7Q96K78 797 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 EDEM2Q9BV94 578 aa12.08□□□□□ -0.48
VCP-207ENST00000493886 OPN3Q9H1Y3 402 aaPredicted RBP12.08□□□□□ -0.48
VCP-207ENST00000493886 E9PLN8 166 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 F5H5K5 113 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 SLC31A2O15432 143 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 CD34P28906 385 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 CD96P40200 585 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 HIST1H3AP68431 136 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 QRFPP83859 136 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 FOXO1Q12778 655 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 UNC119Q13432 240 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 HIST2H3PS2Q5TEC6 136 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 JMJD6Q6NYC1 403 aaPredicted RBP12.07□□□□□ -0.48
VCP-207ENST00000493886 HIST2H3AQ71DI3 136 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 PGAP1Q75T13 922 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 RNF144BQ7Z419 303 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 NAA40Q86UY6 237 aa12.07□□□□□ -0.48
VCP-207ENST00000493886 ZNF584Q8IVC4 421 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms