RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 RHBDL1O75783 438 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 KNG1P01042 644 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 DAPP51397 102 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 DGUOKQ16854 277 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 LRRC10Q5BKY1 277 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 MOB3CQ70IA8 216 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 PNKDQ8N490 385 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 BCAS4Q8TDM0 211 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 C12orf43Q96C57 262 aaKnown RBP12.05□□□□□ -0.48
ATG4B-223ENST00000493618 HIST1H2AAQ96QV6 131 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 TEAD3Q99594 435 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 DCTN5Q9BTE1 182 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 TEX12Q9BXU0 123 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 YIPF3Q9GZM5 350 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 ABCB9Q9NP78 766 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 FAM206AQ9NX38 181 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 KPTNQ9Y664 436 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 MEGF8Q7Z7M0 2845 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 ZNF816-ZNF321PA0A0X1KG74 233 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 A0A1B0GVI7 797 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 MAGEB4O15481 346 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-223ENST00000493618 KCNAB3O43448 404 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 MITFO75030 526 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-223ENST00000493618 DNAJC8O75937 253 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-223ENST00000493618 NDUFB7P17568 137 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 GLRA1P23415 457 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 DCTDP32321 178 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 MAP2K3P46734 347 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 GABRA2P47869 451 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 MFGE8Q08431 387 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-223ENST00000493618 PTGES3Q15185 160 aaKnown RBP12.04□□□□□ -0.48
ATG4B-223ENST00000493618 ATPAF1Q5TC12 328 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-223ENST00000493618 LCN1P1Q5VSP4 162 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 ZNF788Q6ZQV5 615 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 TMEM86BQ8N661 226 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 Q8N7P7 452 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 PAPD5Q8NDF8 572 aaKnown RBP12.04□□□□□ -0.48
ATG4B-223ENST00000493618 OR4F5Q8NH21 305 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 ANGPTL6Q8NI99 470 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 TBC1D15Q8TC07 691 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 OR51E1Q8TCB6 317 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 SSMEM1Q8WWF3 244 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 WFDC12Q8WWY7 111 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 PBOV1Q9GZY1 135 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 SLITRK2Q9H156 845 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 BEX1Q9HBH7 125 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 GPR84Q9NQS5 396 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 SLC25A10Q9UBX3 287 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-223ENST00000493618 IKZF2Q9UKS7 526 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 GTF2A1LQ9UNN4 478 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 MMP24Q9Y5R2 645 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 POMT1Q9Y6A1 747 aa12.04□□□□□ -0.48
ATG4B-223ENST00000493618 RNASEK-C17orf49H0YIS7 233 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 GPR137BO60478 399 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 FAHP16930 419 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 HOXB6P17509 224 aaKnown RBP12.03□□□□□ -0.48
ATG4B-223ENST00000493618 IER3P46695 156 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 C11orf91Q3C1V1 193 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 PLCXD3Q63HM9 321 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 OLFML2AQ68BL7 652 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 FAHD1Q6P587 224 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 KCTD18Q6PI47 426 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-223ENST00000493618 TREML4Q6UXN2 200 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 PLEKHG7Q6ZR37 379 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 C17orf107Q6ZR85 190 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 THAP5Q7Z6K1 395 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 CMTM4Q8IZR5 234 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 UTP4Q969X6 686 aaKnown RBP12.03□□□□□ -0.48
ATG4B-223ENST00000493618 OR8B4Q96RC9 309 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 APOL4Q9BPW4 351 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 CADM1Q9BY67 442 aaKnown RBP12.03□□□□□ -0.48
ATG4B-223ENST00000493618 MROQ9BYG7 248 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 OR51I2Q9H344 312 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 NLKQ9UBE8 527 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 PIGLQ9Y2B2 252 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 FAM96BQ9Y3D0 163 aa12.03□□□□□ -0.48
ATG4B-223ENST00000493618 A0A0U1RQV5 110 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 A0A1W2PQ09 198 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 OR2AT4A6NND4 320 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 GSC2O15499 205 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 NDUFA7O95182 113 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 ACAA1P09110 424 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-223ENST00000493618 RIDAP52758 137 aaKnown RBP12.02□□□□□ -0.49
ATG4B-223ENST00000493618 KRTAP10-3P60369 221 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 GNG3P63215 75 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 CEACAM21Q3KPI0 293 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 FAM76BQ5HYJ3 339 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 LDLRAD3Q86YD5 345 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 ZNF679Q8IYX0 411 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 BATF2Q8N1L9 274 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 TCEANCQ8N8B7 351 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 OR5K1Q8NHB7 308 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 NRBF2Q96F24 287 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 MED30Q96HR3 178 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 ZNF488Q96MN9 340 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 CNN2Q99439 309 aaKnown RBP12.02□□□□□ -0.49
ATG4B-223ENST00000493618 DNTTIP1Q9H147 329 aa12.02□□□□□ -0.49
ATG4B-223ENST00000493618 IGKV1D-17A0A075B6S4 117 aa12.01□□□□□ -0.49
ATG4B-223ENST00000493618 CLPSL1A2RUU4 121 aa12.01□□□□□ -0.49
ATG4B-223ENST00000493618 A6NIN4 97 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms