RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 RGCCQ9H4X1 137 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 NIPAL2Q9H841 368 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 SNTG1Q9NSN8 517 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 FAM206AQ9NX38 181 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 IKZF2Q9UKS7 526 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 OAZ3Q9UMX2 235 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 GTF2A1LQ9UNN4 478 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.83□□□□□ -1
COL6A3-214ENST00000493608 DVL1O14640 695 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 AKR7A2O43488 359 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 NDUFA2O43678 99 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 ENSAO43768 121 aaKnown RBP8.83□□□□□ -1
COL6A3-214ENST00000493608 APOL3O95236 402 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 CST4P01036 141 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 NPY4RP50391 375 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 GPM6AP51674 278 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 RIDAP52758 137 aaKnown RBP8.83□□□□□ -1
COL6A3-214ENST00000493608 IL5RAQ01344 420 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 MFGE8Q08431 387 aaPredicted RBP8.83□□□□□ -1
COL6A3-214ENST00000493608 BAMBIQ13145 260 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 MICBQ29980 383 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 WDR38Q5JTN6 314 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 CEP78Q5JTW2 689 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 TEX36Q5VZQ5 186 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 CD276Q5ZPR3 534 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 RUSC1-AS1Q66K80 236 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 ZNF322Q6U7Q0 402 aaPredicted RBP8.83□□□□□ -1
COL6A3-214ENST00000493608 MOB3CQ70IA8 216 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 BTN2A1Q7KYR7 527 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 DOK3Q7L591 496 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 ZNF679Q8IYX0 411 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 FAM216BQ8N7L0 139 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 SCCPDHQ8NBX0 429 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 OR51G2Q8NGK0 314 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 HPSE2Q8WWQ2 592 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 DUS3LQ96G46 650 aaKnown RBP8.83□□□□□ -1
COL6A3-214ENST00000493608 HIST1H2AAQ96QV6 131 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 CNN2Q99439 309 aaKnown RBP8.83□□□□□ -1
COL6A3-214ENST00000493608 RTL8AQ9BWD3 113 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 PRRG3Q9BZD7 231 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 RIBC2Q9H4K1 309 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 RNPEPL1Q9HAU8 725 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 ADGRL4Q9HBW9 690 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 TRIM36Q9NQ86 728 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 GPR84Q9NQS5 396 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 MPC1Q9Y5U8 109 aa8.83□□□□□ -1
COL6A3-214ENST00000493608 ZNF816-ZNF321PA0A0X1KG74 233 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 TMEM89A2RUT3 159 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 DNAJC9-AS1A6NH13 148 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 A6NIN4 97 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 ZNF732B4DXR9 585 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 ZNF670-ZNF695F2Z2N8 137 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 RHBDL1O75783 438 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 TOX4O94842 621 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 RPP14O95059 124 aaKnown RBP8.82□□□□□ -1
COL6A3-214ENST00000493608 SELLP14151 372 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 FAHP16930 419 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 AMY2BP19961 511 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 PRTN3P24158 256 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 CFPP27918 469 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 CFHR2P36980 270 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 ARF6P62330 175 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 ROM1Q03395 351 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 PRB3Q04118 309 aaPredicted RBP8.82□□□□□ -1
COL6A3-214ENST00000493608 IKZF1Q13422 519 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 ODF4Q2M2E3 257 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 NXNL2Q5VZ03 156 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 DEGS2Q6QHC5 323 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 SSX6Q7RTT6 188 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 THAP5Q7Z6K1 395 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 PDZD9Q8IXQ8 264 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 ZDHHC23Q8IYP9 409 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 FTMTQ8N4E7 242 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 ASB17Q8WXJ9 295 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 UBE2FQ969M7 185 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 CENPNQ96H22 339 aaPredicted RBP8.82□□□□□ -1
COL6A3-214ENST00000493608 GABARAPL1Q9H0R8 117 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 TLNRD1Q9H1K6 362 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 TNFRSF19Q9NS68 423 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 DNAJB11Q9UBS4 358 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 PIGLQ9Y2B2 252 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 TMEM14AQ9Y6G1 99 aa8.82□□□□□ -1
COL6A3-214ENST00000493608 A0A0U1RQV5 110 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 ACOD1A6NK06 481 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 SLC22A31A6NKX4 558 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 SRRM5B3KS81 715 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 ZNF879B4DU55 563 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 H3BSH0 61 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 ZNF254O75437 659 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 PLATP00750 562 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 TTRP02766 147 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 PPIAL4GP0DN37 164 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 FCGR1AP12314 374 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 MMP9P14780 707 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 MUC1P15941 1255 aaPredicted RBP8.81□□□□□ -1
COL6A3-214ENST00000493608 MTNR1AP48039 350 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 RIPPLY1Q0D2K3 151 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 KPNB1Q14974 876 aaKnown RBP8.81□□□□□ -1
COL6A3-214ENST00000493608 SNCBQ16143 134 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 DEFB112Q30KQ8 113 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms