RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 OPRL1P41146 370 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 MAP2K3P46734 347 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 GABRA2P47869 451 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 TGM4P49221 684 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 LGALS4P56470 323 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 GMFBP60983 142 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 RPS7P62081 194 aaKnown RBP9.51□□□□□ -0.89
COL6A3-213ENST00000493475 GNG3P63215 75 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 ZNF770Q6IQ21 691 aaPredicted RBP9.51□□□□□ -0.89
COL6A3-213ENST00000493475 KCTD18Q6PI47 426 aaPredicted RBP9.51□□□□□ -0.89
COL6A3-213ENST00000493475 LYPD4Q6UWN0 246 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 CD300LDQ6UXZ3 194 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 Q6ZSV7 163 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 KRT77Q7Z794 578 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 OR10G2Q8NGC3 310 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 OR8D4Q8NGM9 314 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 OR5P3Q8WZ94 311 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 RAB3IPQ96QF0 476 aaPredicted RBP9.51□□□□□ -0.89
COL6A3-213ENST00000493475 OR51V1Q9H2C8 321 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 PPA2Q9H2U2 334 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 HEXA-AS1Q9H8Q6 139 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 ZNF446Q9NWS9 450 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 RASL12Q9NYN1 266 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 LAMP5Q9UJQ1 280 aa9.51□□□□□ -0.89
COL6A3-213ENST00000493475 ARRDC5A6NEK1 342 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 ACOD1A6NK06 481 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 OR5B21A6NL26 309 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 OR2AT4A6NND4 320 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 SLC1A7O00341 560 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 MTRF1O75570 445 aaKnown RBP9.5□□□□□ -0.89
COL6A3-213ENST00000493475 RAP2AP10114 183 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 CLUP10909 449 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 PSMA6P60900 246 aaKnown RBP9.5□□□□□ -0.89
COL6A3-213ENST00000493475 ACTR3P61158 418 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 HOXA4Q00056 320 aaPredicted RBP9.5□□□□□ -0.89
COL6A3-213ENST00000493475 EGR3Q06889 387 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 DBPQ10586 325 aaPredicted RBP9.5□□□□□ -0.89
COL6A3-213ENST00000493475 HERPUD1Q15011 391 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 AANATQ16613 207 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 SMIM21Q3B7S5 101 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 KLHL12Q53G59 568 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 SLC35D3Q5M8T2 416 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 ZNF788Q6ZQV5 615 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 WDR86Q86TI4 376 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 C11orf53Q8IXP5 236 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 BEND2Q8NDZ0 799 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 TMEM185AQ8NFB2 350 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 OR5T2Q8NGG2 359 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 OR4Q3Q8NH05 313 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 OTOSQ8NHW6 89 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 FAM110DQ8TAY7 271 aaPredicted RBP9.5□□□□□ -0.89
COL6A3-213ENST00000493475 GIPC3Q8TF64 312 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 RPL3LQ92901 407 aaKnown RBP9.5□□□□□ -0.89
COL6A3-213ENST00000493475 MROQ9BYG7 248 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 PRRG3Q9BZD7 231 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 NPFFR1Q9GZQ6 430 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 RANBP3Q9H6Z4 567 aaPredicted RBP9.5□□□□□ -0.89
COL6A3-213ENST00000493475 YY1AP1Q9H869 796 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 SNTG1Q9NSN8 517 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 FBLN5Q9UBX5 448 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 LRP12Q9Y561 859 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 TMEM14AQ9Y6G1 99 aa9.5□□□□□ -0.89
COL6A3-213ENST00000493475 FAM183AA6NL82 134 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 H3BUX3 64 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 AKR7A2O43488 359 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 ANGPTL7O43827 346 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 PEX14O75381 377 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 E2F6O75461 281 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 CST1P01037 141 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 ACAA1P09110 424 aaPredicted RBP9.49□□□□□ -0.89
COL6A3-213ENST00000493475 GPM6AP51674 278 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 LRRC75BQ2VPJ9 315 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 ZNF829Q3KNS6 432 aaPredicted RBP9.49□□□□□ -0.89
COL6A3-213ENST00000493475 CEACAM21Q3KPI0 293 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 ZBTB37Q5TC79 503 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 LINC01590Q5TEZ4 76 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 LCN1P1Q5VSP4 162 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 LCN8Q6JVE9 175 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 DEGS2Q6QHC5 323 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 REC114Q7Z4M0 266 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 FAM185AQ8N0U4 392 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 ANGPTL6Q8NI99 470 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 ZNRF4Q8WWF5 429 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 DUS3LQ96G46 650 aaKnown RBP9.49□□□□□ -0.89
COL6A3-213ENST00000493475 POLDIP2Q9Y2S7 368 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 MAB21L2Q9Y586 359 aa9.49□□□□□ -0.89
COL6A3-213ENST00000493475 A0A0U1RQV5 110 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 A0A1W2PRD5 423 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 A0A1W2PRF3 423 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 A0A1W2PRM7 423 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.48□□□□□ -0.89
COL6A3-213ENST00000493475 ZNF254O75437 659 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 RIPPLY1Q0D2K3 151 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 TRIM25Q14258 630 aaKnown RBP9.48□□□□□ -0.89
COL6A3-213ENST00000493475 FAM76BQ5HYJ3 339 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 ZNF684Q5T5D7 378 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 PLBD1Q6P4A8 553 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 PRSS45Q7RTY3 260 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 ZNF573Q86YE8 665 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 ZNF561Q8N587 486 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms