RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 TCEANCQ8N8B7 351 aa11.29□□□□□ -0.6
IRF1-210ENST00000493208 BBS1Q8NFJ9 593 aa11.29□□□□□ -0.6
IRF1-210ENST00000493208 SSMEM1Q8WWF3 244 aa11.29□□□□□ -0.6
IRF1-210ENST00000493208 DACT3Q96B18 629 aaPredicted RBP11.29□□□□□ -0.6
IRF1-210ENST00000493208 TMIGD2Q96BF3 282 aa11.29□□□□□ -0.6
IRF1-210ENST00000493208 CENPNQ96H22 339 aaPredicted RBP11.29□□□□□ -0.6
IRF1-210ENST00000493208 AMELYQ99218 206 aa11.29□□□□□ -0.6
IRF1-210ENST00000493208 DPAGT1Q9H3H5 408 aa11.29□□□□□ -0.6
IRF1-210ENST00000493208 ACOXLQ9NUZ1 547 aa11.29□□□□□ -0.6
IRF1-210ENST00000493208 CLN6Q9NWW5 311 aa11.29□□□□□ -0.6
IRF1-210ENST00000493208 ONECUT1Q9UBC0 465 aa11.29□□□□□ -0.6
IRF1-210ENST00000493208 NUFIP1Q9UHK0 495 aaKnown RBP11.29□□□□□ -0.6
IRF1-210ENST00000493208 RPUSD1Q9UJJ7 312 aaKnown RBP11.29□□□□□ -0.6
IRF1-210ENST00000493208 ZAR1LA6NP61 321 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 SERPINA3P01011 423 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 RPSAP08865 295 aaKnown RBP11.28□□□□□ -0.6
IRF1-210ENST00000493208 GPM6AP51674 278 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 CXCR4P61073 352 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 FAM76BQ5HYJ3 339 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 WDR38Q5JTN6 314 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 NCR3LG1Q68D85 454 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 KDM4DQ6B0I6 523 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 ZFP1Q6P2D0 407 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 OR8J1Q8NGP2 316 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 TRUB1Q8WWH5 349 aaKnown RBP11.28□□□□□ -0.6
IRF1-210ENST00000493208 H1FXQ92522 213 aaKnown RBP11.28□□□□□ -0.6
IRF1-210ENST00000493208 DUS3LQ96G46 650 aaKnown RBP11.28□□□□□ -0.6
IRF1-210ENST00000493208 FAM206AQ9NX38 181 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 IMPAD1Q9NX62 359 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 NLKQ9UBE8 527 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 SLC7A11Q9UPY5 501 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 PIGLQ9Y2B2 252 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 R4GMQ9 66 aa11.28□□□□□ -0.6
IRF1-210ENST00000493208 IGHV3OR15-7A0A075B7D8 119 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 IGHV3OR16-10A0A075B7F0 116 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 TRBV23-1A0A0A0MS06 115 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 IGHV1-69DA0A0B4J2H0 117 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 A0A1W2PQ09 198 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 ZNF732B4DXR9 585 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 C22orf46C9J442 243 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 SLC1A7O00341 560 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 DLGAP1O14490 977 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 PRKYO43930 277 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 GATBO75879 557 aaKnown RBP11.27□□□□□ -0.61
IRF1-210ENST00000493208 PAHP00439 452 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 NRASP01111 189 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 IGHV1-69P01742 117 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 OR2T7P0C7T2 308 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 CSNK2BP67870 215 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 IKZF1Q13422 519 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 SLC9A3R2Q15599 337 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 CLVS2Q5SYC1 327 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 CCDC121Q6ZUS5 278 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 MOB3CQ70IA8 216 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 DTX3Q8N9I9 347 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 OR2T27Q8NH04 317 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 OR4F5Q8NH21 305 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 OR51E1Q8TCB6 317 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 RAB3IPQ96QF0 476 aaPredicted RBP11.27□□□□□ -0.61
IRF1-210ENST00000493208 IL4I1Q96RQ9 567 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 CCL13Q99616 98 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 NEK6Q9HC98 313 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 ESM1Q9NQ30 184 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 GPR84Q9NQS5 396 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 CTSZQ9UBR2 303 aa11.27□□□□□ -0.61
IRF1-210ENST00000493208 SLC25A10Q9UBX3 287 aaPredicted RBP11.27□□□□□ -0.61
IRF1-210ENST00000493208 C5orf63A6NC05 138 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 OR2AT4A6NND4 320 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 TNFRSF13BO14836 293 aaPredicted RBP11.26□□□□□ -0.61
IRF1-210ENST00000493208 SULT1C4O75897 302 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 NDUFB7P17568 137 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 ACKR3P25106 362 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 HTR1FP30939 366 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 GABRA2P47869 451 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 CAPZA1P52907 286 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 CAV3P56539 151 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 ARF6P62330 175 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 ACTC1P68032 377 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 ACTA1P68133 377 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 HNRNPA0Q13151 305 aaKnown RBP11.26□□□□□ -0.61
IRF1-210ENST00000493208 C12orf73Q69YU5 71 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 STUMQ69YW2 141 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 FIP1L1Q6UN15 594 aaKnown RBP11.26□□□□□ -0.61
IRF1-210ENST00000493208 BRD3OSQ6XYD6 125 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 PLEKHG7Q6ZR37 379 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 C1orf122Q6ZSJ8 110 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 KRT74Q7RTS7 529 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 BCL6BQ8N143 479 aaPredicted RBP11.26□□□□□ -0.61
IRF1-210ENST00000493208 YIPF7Q8N8F6 280 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 OR51G2Q8NGK0 314 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 OR5D13Q8NGL4 314 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 RPL3LQ92901 407 aaKnown RBP11.26□□□□□ -0.61
IRF1-210ENST00000493208 LHX4Q969G2 390 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 ZNF747Q9BV97 191 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 RIBC2Q9H4K1 309 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 PRDM13Q9H4Q3 707 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 BEX1Q9HBH7 125 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 ZNF319Q9P2F9 582 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 OR52A1Q9UKL2 312 aa11.26□□□□□ -0.61
IRF1-210ENST00000493208 PCDHGB1Q9Y5G3 927 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms