RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ACSM1Q08AH1 577 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 RIPPLY1Q0D2K3 151 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 IKZF1Q13422 519 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 FLOT2Q14254 428 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 SNAPC1Q16533 368 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 TMEM179BQ7Z7N9 219 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 SPATA24Q86W54 205 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 FAM216BQ8N7L0 139 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 WFDC12Q8WWY7 111 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 RPL3LQ92901 407 aaKnown RBP10.26□□□□□ -0.77
COL6A1-205ENST00000492851 CLPTM1LQ96KA5 538 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 MNTQ99583 582 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 NLKQ9UBE8 527 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 SLC25A10Q9UBX3 287 aaPredicted RBP10.26□□□□□ -0.77
COL6A1-205ENST00000492851 LRP12Q9Y561 859 aa10.26□□□□□ -0.77
COL6A1-205ENST00000492851 A0A0U1RQK1 487 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 OR2AT4A6NND4 320 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 M0QZ24 198 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 SIGLEC5O15389 551 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 WIPF1O43516 503 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 GPR137BO60478 399 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 PAHP00439 452 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 SLC2A5P22732 501 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 GLRA1P23415 457 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 ACKR3P25106 362 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 UBE2E1P51965 193 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 CRISP1P54107 249 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 ROM1Q03395 351 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 APOFQ13790 326 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 ZNF829Q3KNS6 432 aaPredicted RBP10.25□□□□□ -0.77
COL6A1-205ENST00000492851 TRPM8Q7Z2W7 1104 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 ZNF679Q8IYX0 411 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 DTX3Q8N9I9 347 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 OR5T2Q8NGG2 359 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 OR8B12Q8NGG6 310 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 OR5D13Q8NGL4 314 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 OR5R1Q8NH85 324 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 ANGPTL6Q8NI99 470 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 H1FXQ92522 213 aaKnown RBP10.25□□□□□ -0.77
COL6A1-205ENST00000492851 OR51I2Q9H344 312 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 METTL8Q9H825 291 aaKnown RBP10.25□□□□□ -0.77
COL6A1-205ENST00000492851 PAPOLBQ9NRJ5 636 aaKnown RBP10.25□□□□□ -0.77
COL6A1-205ENST00000492851 TVP23BQ9NYZ1 205 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 H2AFY2Q9P0M6 372 aaPredicted RBP10.25□□□□□ -0.77
COL6A1-205ENST00000492851 SF3B6Q9Y3B4 125 aaKnown RBP10.25□□□□□ -0.77
COL6A1-205ENST00000492851 RNF114Q9Y508 228 aa10.25□□□□□ -0.77
COL6A1-205ENST00000492851 MEGF8Q7Z7M0 2845 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 TRBV23-1A0A0A0MS06 115 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 A0A1W2PQ09 198 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 ZNF732B4DXR9 585 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 NPFFO15130 113 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 AKR7A2O43488 359 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 FKBP6O75344 327 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 FCN3O75636 299 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 CLPXO76031 633 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 IGHV4-59P01825 116 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 NDUFB7P17568 137 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 PRKACGP22612 351 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 TGFBR2P37173 567 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 GPM6AP51674 278 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 RIDAP52758 137 aaKnown RBP10.24□□□□□ -0.77
COL6A1-205ENST00000492851 ESRRGP62508 458 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 BRICD5Q6PL45 260 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 COMMD2Q86X83 199 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 PIP4P2Q8N4L2 257 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 ZSCAN4Q8NAM6 433 aaPredicted RBP10.24□□□□□ -0.77
COL6A1-205ENST00000492851 LYZL4Q96KX0 146 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 CITED1Q99966 193 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 PBOV1Q9GZY1 135 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 FAM234AQ9H0X4 552 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 WDR13Q9H1Z4 485 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 PPP1R3EQ9H7J1 279 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 MOB1AQ9H8S9 216 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 SNTG1Q9NSN8 517 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 FAM206AQ9NX38 181 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 ENOPH1Q9UHY7 261 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 ENPP5Q9UJA9 477 aa10.24□□□□□ -0.77
COL6A1-205ENST00000492851 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.24□□□□□ -0.77
COL6A1-205ENST00000492851 MGAM2Q2M2H8 2515 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 hCG_1809904A0A1W2PP81 198 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 A0A1W2PPE2 198 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 A0A1W2PR64 198 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 A0A1W2PRV1 198 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 TCRBV3S1A0A5B6 114 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 SLC22A31A6NKX4 558 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 DNAJC8O75937 253 aaPredicted RBP10.23□□□□□ -0.77
COL6A1-205ENST00000492851 AMY2BP19961 511 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 GABRA2P47869 451 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 GMFBP60983 142 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 RELBQ01201 579 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 PTGES3Q15185 160 aaKnown RBP10.23□□□□□ -0.77
COL6A1-205ENST00000492851 DGUOKQ16854 277 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 ZNF684Q5T5D7 378 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 TMEM236Q5W0B7 351 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 MOB3CQ70IA8 216 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 ZNF573Q86YE8 665 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 PDZD9Q8IXQ8 264 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 LINC01006Q8NI28 216 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 HPSE2Q8WWQ2 592 aa10.23□□□□□ -0.77
COL6A1-205ENST00000492851 SEH1LQ96EE3 360 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms