RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ZNF878C9JN71 531 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 H0YAE9 185 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 ZNF593O00488 134 aaPredicted RBP10.66□□□□□ -0.7
USF1-206ENST00000491629 SPARCP09486 303 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 PSG2P11465 335 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 POU1F1P28069 291 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 ENTPD1P49961 510 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 TIGD6Q17RP2 521 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 PLA1AQ53H76 456 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 TCTEX1D4Q5JR98 221 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 TEX30Q5JUR7 227 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 LIAT1Q6ZQX7 453 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 ARPINQ7Z6K5 226 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 TMEM219Q86XT9 240 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 FAM185AQ8N0U4 392 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 OR8D4Q8NGM9 314 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 OR5P3Q8WZ94 311 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 OR5M11Q96RB7 305 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 PAPOLGQ9BWT3 736 aaKnown RBP10.66□□□□□ -0.7
USF1-206ENST00000491629 NMNAT2Q9BZQ4 307 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 DCAF13Q9NV06 445 aaKnown RBP10.66□□□□□ -0.7
USF1-206ENST00000491629 NLKQ9UBE8 527 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 AP3M1Q9Y2T2 418 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 FAM32AQ9Y421 112 aaKnown RBP10.66□□□□□ -0.7
USF1-206ENST00000491629 TENM2Q9NT68 2774 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 EPPK1P58107 5090 aaKnown RBP10.65□□□□□ -0.7
USF1-206ENST00000491629 ZNF850A8MQ14 1090 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 ANXA2P07355 339 aaKnown RBP10.65□□□□□ -0.7
USF1-206ENST00000491629 CLUP10909 449 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 JUNBP17275 347 aaPredicted RBP10.65□□□□□ -0.7
USF1-206ENST00000491629 CD33P20138 364 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 ZNF121P58317 390 aaPredicted RBP10.65□□□□□ -0.7
USF1-206ENST00000491629 BLCAPP62952 87 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 CD83Q01151 205 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 PRDX4Q13162 271 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 BLMHQ13867 455 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 TAF13Q15543 124 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 GFOD2Q3B7J2 385 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 FAM57BQ71RH2 274 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 LINC00471Q8N535 108 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 SLC37A3Q8NCC5 494 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 OR4C15Q8NGM1 316 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 LYZL4Q96KX0 146 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 WWC2-AS2Q96NR7 200 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 MICU1Q9BPX6 476 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 KRCC1Q9NPI7 259 aaPredicted RBP10.65□□□□□ -0.7
USF1-206ENST00000491629 FGFR1OP2Q9NVK5 253 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 DNAJC27Q9NZQ0 273 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 CD300AQ9UGN4 299 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 TCF19Q9Y242 345 aa10.65□□□□□ -0.7
USF1-206ENST00000491629 RYR2Q92736 4967 aa10.65□□□□□ -0.71
USF1-206ENST00000491629 TRBV23-1A0A0A0MS06 115 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 A0A1W2PRX2 142 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 GADD45GO95257 159 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 COX4I1P13073 169 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 CCL3L1P16619 93 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 COX7A1P24310 79 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 GABRA2P47869 451 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 SPIBQ01892 262 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 TSPAN31Q12999 210 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 CNN3Q15417 329 aaKnown RBP10.64□□□□□ -0.71
USF1-206ENST00000491629 DMRTC1Q5HYR2 192 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 LINC01590Q5TEZ4 76 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 TMEM200BQ69YZ2 307 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 TMEM185AQ8NFB2 350 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 OR2T4Q8NH00 348 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 OR5K1Q8NHB7 308 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 SDSLQ96GA7 329 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 KCTD14Q9BQ13 255 aaPredicted RBP10.64□□□□□ -0.71
USF1-206ENST00000491629 OCSTAMPQ9BR26 566 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 RTL8AQ9BWD3 113 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 ABCD2Q9UBJ2 740 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 KIAA2026Q5HYC2 2103 aa10.64□□□□□ -0.71
USF1-206ENST00000491629 TMEM210A6NLX4 147 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 HMGB1P1B2RPK0 211 aaPredicted RBP10.63□□□□□ -0.71
USF1-206ENST00000491629 ATP6V1G2O95670 118 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 SPI1P17947 270 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 GLRA1P23415 457 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 FMO3P31513 532 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 GNALP38405 381 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 DLX6P56179 175 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 GRB2P62993 217 aaKnown RBP10.63□□□□□ -0.71
USF1-206ENST00000491629 IL5RAQ01344 420 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 CRMP1Q14194 572 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 EIF2B1Q14232 305 aaKnown RBP10.63□□□□□ -0.71
USF1-206ENST00000491629 ZNF273Q14593 569 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 DEFB121Q5J5C9 76 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 GLYATQ6IB77 296 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 CD177Q8N6Q3 437 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 CSNK2A3Q8NEV1 391 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 RP9Q8TA86 221 aaKnown RBP10.63□□□□□ -0.71
USF1-206ENST00000491629 RNF133Q8WVZ7 376 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 RNF170Q96K19 258 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 HOPXQ9BPY8 73 aaPredicted RBP10.63□□□□□ -0.71
USF1-206ENST00000491629 BTBD10Q9BSF8 475 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 ABHD6Q9BV23 337 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 MUC13Q9H3R2 512 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 BRD7Q9NPI1 651 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 MRGBPQ9NV56 204 aa10.63□□□□□ -0.71
USF1-206ENST00000491629 IL20Q9NYY1 176 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms