RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 EDEM2Q9BV94 578 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 TBX21Q9UL17 535 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 HSD17B6O14756 317 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 BCKDHBP21953 392 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 RAB4BP61018 213 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 SKP2Q13309 424 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 THNSL2Q86YJ6 484 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 PLXDC1Q8IUK5 500 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 CCDC54Q8NEL0 328 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 GBF1Q92538 1859 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 RNF222A6NCQ9 220 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 ZNF727A8MUV8 499 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 MDKP21741 143 aaPredicted RBP11.43□□□□□ -0.58
SHOX2-205ENST00000490689 PNLIPRP2P54317 469 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 YPEL5P62699 121 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 Q7L0L9 218 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 DOK3Q7L591 496 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 ZNF429Q86V71 674 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 MRPL24Q96A35 216 aaKnown RBP11.43□□□□□ -0.58
SHOX2-205ENST00000490689 IP6K3Q96PC2 410 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 CCNL2Q96S94 520 aaPredicted RBP11.43□□□□□ -0.58
SHOX2-205ENST00000490689 RCL1Q9Y2P8 373 aaKnown RBP11.43□□□□□ -0.58
SHOX2-205ENST00000490689 ASXL3Q9C0F0 2248 aa11.43□□□□□ -0.58
SHOX2-205ENST00000490689 FAM24AA6NFZ4 105 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 PLRG1O43660 514 aaKnown RBP11.42□□□□□ -0.58
SHOX2-205ENST00000490689 HTR5AP47898 357 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 DHRS11Q6UWP2 260 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 DRAM2Q6UX65 266 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 ANKRD33Q7Z3H0 272 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 RPUSD4Q96CM3 377 aaKnown RBP11.42□□□□□ -0.58
SHOX2-205ENST00000490689 POM121Q96HA1 1249 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 RHOVQ96L33 236 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 FAAP24Q9BTP7 215 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 YKT6O15498 198 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 FASLGP48023 281 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 FHITP49789 147 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 RAB1AP62820 205 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 MRGPRX1Q96LB2 322 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 NMES1Q9C002 83 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 H3BMH7 237 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 FOXL2P58012 376 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 KISS1Q15726 138 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 ZNF528Q3MIS6 628 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 CST9LP1Q5W188 147 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 RAB39BQ96DA2 213 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 OR10C1Q96KK4 312 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 GSN-AS1Q9NRJ2 163 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 FGF21Q9NSA1 209 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 RCC2Q9P258 522 aaKnown RBP11.42□□□□□ -0.58
SHOX2-205ENST00000490689 WSB1Q9Y6I7 421 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 MPDZO75970 2070 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 PAPPA2Q9BXP8 1791 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 HBE1P02100 147 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 INSM1Q01101 510 aaPredicted RBP11.42□□□□□ -0.58
SHOX2-205ENST00000490689 SRYQ05066 204 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 LY6G6FQ5SQ64 297 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 CATSPERDQ86XM0 798 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 NAA11Q9BSU3 229 aaPredicted RBP11.42□□□□□ -0.58
SHOX2-205ENST00000490689 VN1R1Q9GZP7 353 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 PATZ1Q9HBE1 687 aaKnown RBP11.42□□□□□ -0.58
SHOX2-205ENST00000490689 SLC39A9Q9NUM3 307 aa11.42□□□□□ -0.58
SHOX2-205ENST00000490689 TIMM8BQ9Y5J9 83 aaPredicted RBP11.42□□□□□ -0.58
SHOX2-205ENST00000490689 CASP8AP2Q9UKL3 1982 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 CDC14BO60729 498 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 IGHV3-9P01782 118 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 OR5AC1P0C628 307 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 STPG1Q5TH74 334 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 OR8G2PQ6IF36 304 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 FGF14Q92915 247 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 SPSB2Q99619 263 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 ANKRD10Q9NXR5 420 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 LIPGQ9Y5X9 500 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 NSG1A0A0A6YYJ2 146 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 IGHV3-15A0A0B4J1V0 119 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 BLACEA4D250 179 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 MFNGO00587 321 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 HMGB3O15347 200 aaKnown RBP11.41□□□□□ -0.58
SHOX2-205ENST00000490689 GPR137BO60478 399 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 OR2J2O76002 312 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 FOXF1Q12946 379 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 OR2B11Q5JQS5 317 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 RPS4Y2Q8TD47 263 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 ZNF845Q96IR2 970 aaPredicted RBP11.41□□□□□ -0.58
SHOX2-205ENST00000490689 TFF2Q03403 129 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 CNN3Q15417 329 aaKnown RBP11.41□□□□□ -0.58
SHOX2-205ENST00000490689 RTL6Q6ICC9 239 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 LINC00469Q8N7U9 141 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 BHLHE23Q8NDY6 225 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 MR1Q95460 341 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 PILRAQ9UKJ1 303 aa11.41□□□□□ -0.58
SHOX2-205ENST00000490689 STRAPQ9Y3F4 350 aaKnown RBP11.41□□□□□ -0.58
SHOX2-205ENST00000490689 A0A1W2PPQ1 181 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 TNFRSF10CO14798 259 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 MYF5P13349 255 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 HNRNPKP61978 463 aaKnown RBP eCLIP11.4□□□□□ -0.58
SHOX2-205ENST00000490689 C8orf44Q96CB5 159 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 DNAJB11Q9UBS4 358 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 LAMP3Q9UQV4 416 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 TRBV5-7A0A0A0MS05 114 aa11.4□□□□□ -0.58
SHOX2-205ENST00000490689 BTBD17A6NE02 478 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms