RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-210	ENST00000490668	NIPSNAP1	Q9BPW8	284 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	KCNS3	Q9BQ31	491 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	ALKBH7	Q9BT30	221 aa	Predicted RBP	3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	TSSK6	Q9BXA6	273 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	OSBPL10	Q9BXB5	764 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	GABARAPL1	Q9H0R8	117 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	SYT4	Q9H2B2	425 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	EGLN3	Q9H6Z9	239 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	S100A14	Q9HCY8	104 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	CCNB1IP1	Q9NPC3	277 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	SLC17A5	Q9NRA2	495 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	DDX28	Q9NUL7	540 aa	Known RBP	3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	TMEM38B	Q9NVV0	291 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	C1RL	Q9NZP8	487 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	FBXL3	Q9UKT7	428 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	ZNF346	Q9UL40	294 aa	Known RBP	3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	POLR1D	Q9Y2S0	133 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	ORC6	Q9Y5N6	252 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	HIVEP3	Q5T1R4	2406 aa		3.74	□□□□□ -1.81
SFPQ-210	ENST00000490668	CHD6	Q8TD26	2715 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	PCNX3	Q9H6A9	2034 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	GTF3C1	Q12789	2109 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	NBAS	A2RRP1	2371 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	TRAV26-1	A0A087WT03	109 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668		A0A1W2PR80	420 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	KRTAP23-1	A1A580	65 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668		H3BNX3	289 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668		H7C1Q1	480 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668		M0R1B8	84 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	BHLHE40	O14503	412 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	DVL1	O14640	695 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	EI24	O14681	340 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	IMPA2	O14732	288 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	WNT9B	O14905	357 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	MGRN1	O60291	552 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	FAM20B	O75063	409 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	KHDRBS3	O75525	346 aa	Known RBP	3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	EGR2	P11161	476 aa	Predicted RBP	3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	CD79A	P11912	226 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	ZNF26	P17031	533 aa	Predicted RBP	3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	PRKACB	P22694	351 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	UCP1	P25874	307 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	BDKRB2	P30411	391 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	DUT	P33316	252 aa	Known RBP	3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	ARR3	P36575	388 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	NUP62	P37198	522 aa	Predicted RBP	3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	ZNF83	P51522	516 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	IDH3G	P51553	393 aa	Predicted RBP	3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	ZNF133	P52736	654 aa	Predicted RBP	3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	FOXG1	P55316	489 aa	Predicted RBP	3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	P2RX3	P56373	397 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	FXYD6P3	P58550	94 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	ESRRG	P62508	458 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	GLO1	Q04760	184 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	SLC3A1	Q07837	685 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	KEAP1	Q14145	624 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	HIST3H3	Q16695	136 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	THEM4	Q5T1C6	240 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	ADAM5	Q6NVV9	412 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	FAHD1	Q6P587	224 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	LEG1	Q6P5S2	330 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	TREML4	Q6UXN2	200 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	ZNF771	Q7L3S4	317 aa	Predicted RBP	3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	ZNF627	Q7L945	461 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	SLC16A14	Q7RTX9	510 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	TMEM179B	Q7Z7N9	219 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	AMIGO2	Q86SJ2	522 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	PEG10	Q86TG7	708 aa	Known RBP	3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	HS3ST5	Q8IZT8	346 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	SLC22A24	Q8N4F4	322 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	LINC00469	Q8N7U9	141 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	PROKR2	Q8NFJ6	384 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	BBS1	Q8NFJ9	593 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	OR52E2	Q8NGJ4	325 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	OR8D4	Q8NGM9	314 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	OR2T4	Q8NH00	348 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	OR4K13	Q8NH42	304 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	IGFBPL1	Q8WX77	278 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	EME1	Q96AY2	570 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	DACT3	Q96B18	629 aa	Predicted RBP	3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	PIK3IP1	Q96FE7	263 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	COQ2	Q96H96	371 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668		Q96MF0	132 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	SLC38A2	Q96QD8	506 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	NMNAT3	Q96T66	252 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	CIB1	Q99828	191 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	RBM4B	Q9BQ04	359 aa	Known RBP	3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	C9orf16	Q9BUW7	83 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	RBM4	Q9BWF3	364 aa	Known RBP	3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	PLA2G12A	Q9BZM1	189 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	RACGAP1	Q9H0H5	632 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	VCX	Q9H320	206 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	C1orf198	Q9H425	327 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	C5orf66	Q9H5L9	145 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	RERGL	Q9H628	205 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	RNF121	Q9H920	327 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	SLC25A19	Q9HC21	320 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	NEK6	Q9HC98	313 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	RAB18	Q9NP72	206 aa		3.73	□□□□□ -1.81
SFPQ-210	ENST00000490668	C8orf4	Q9NR00	106 aa		3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms