RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 RP9Q8TA86 221 aaKnown RBP11.28□□□□□ -0.6
VARS-227ENST00000489979 GNPDA2Q8TDQ7 276 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 OR5P3Q8WZ94 311 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 RNF170Q96K19 258 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 WWC2-AS2Q96NR7 200 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 CDCA4Q9BXL8 241 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 WNT10AQ9GZT5 417 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 OR10A2Q9H208 303 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 HEXA-AS1Q9H8Q6 139 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 SP140LQ9H930 580 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 BRD7Q9NPI1 651 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 DCAF13Q9NV06 445 aaKnown RBP11.28□□□□□ -0.6
VARS-227ENST00000489979 ZNF222Q9UK12 451 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 SAMD4AQ9UPU9 718 aaKnown RBP11.28□□□□□ -0.6
VARS-227ENST00000489979 TCF19Q9Y242 345 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 MPC1Q9Y5U8 109 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 V9GYQ6 96 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 WI2-2373I1.2A0A1W2PRP0 233 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 VGLL3A8MV65 326 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 SLC22A2O15244 555 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 RHBDL1O75783 438 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 GLCEO94923 617 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 COX4I1P13073 169 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 PAICSP22234 425 aaKnown RBP11.27□□□□□ -0.61
VARS-227ENST00000489979 ACKR3P25106 362 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 DCTDP32321 178 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 MSX2P35548 267 aaPredicted RBP11.27□□□□□ -0.61
VARS-227ENST00000489979 CAPZA1P52907 286 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 KRTAP10-11P60412 298 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 ERVFRD-1P60508 538 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 TSPAN31Q12999 210 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 EIF2B1Q14232 305 aaKnown RBP11.27□□□□□ -0.61
VARS-227ENST00000489979 Q6ZS46 218 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 DYNAPQ8N1N2 210 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 FTMTQ8N4E7 242 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 C11orf42Q8N5U0 333 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 OR52L1Q8NGH7 329 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 OR52H1Q8NGJ2 320 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 OR5K1Q8NHB7 308 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 HPSE2Q8WWQ2 592 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 PIGCQ92535 297 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 PRSS22Q9GZN4 317 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 FGFR1OP2Q9NVK5 253 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 ARGLU1Q9NWB6 273 aaPredicted RBP11.27□□□□□ -0.61
VARS-227ENST00000489979 CDH10Q9Y6N8 788 aa11.27□□□□□ -0.61
VARS-227ENST00000489979 A6NDX4 124 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 CST4P01036 141 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 APOC1P02654 83 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 PF4V1P10720 104 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 CLUP10909 449 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 CRMP1Q14194 572 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 TMEM95Q3KNT9 176 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 ARSJQ5FYB0 599 aaPredicted RBP11.26□□□□□ -0.61
VARS-227ENST00000489979 TIGD4Q8IY51 512 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 OR6K6Q8NGW6 343 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 SDSLQ96GA7 329 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 PGAM5Q96HS1 289 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 YY1AP1Q9H869 796 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 ABCB9Q9NP78 766 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 ABCB10Q9NRK6 738 aa11.26□□□□□ -0.61
VARS-227ENST00000489979 FAM90A8PA6NJQ4 464 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 NDUFAB1O14561 156 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 SEMG1P04279 462 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 CCL3L1P16619 93 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 SPI1P17947 270 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 VDAC2P45880 294 aaPredicted RBP11.25□□□□□ -0.61
VARS-227ENST00000489979 NUDT2P50583 147 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 GPM6AP51674 278 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 RPL31P62899 125 aaKnown RBP11.25□□□□□ -0.61
VARS-227ENST00000489979 BLCAPP62952 87 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 CD83Q01151 205 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 TMEM200BQ69YZ2 307 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 RPL13AP3Q6NVV1 102 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 ZNF782Q6ZMW2 699 aaPredicted RBP11.25□□□□□ -0.61
VARS-227ENST00000489979 ZDHHC23Q8IYP9 409 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 OR8D4Q8NGM9 314 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 RPS4Y2Q8TD47 263 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 RNF133Q8WVZ7 376 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 AMELYQ99218 206 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 ABHD6Q9BV23 337 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 NMNAT2Q9BZQ4 307 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 RGCCQ9H4X1 137 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 EFCAB1Q9HAE3 211 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 ABCD2Q9UBJ2 740 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 LRP12Q9Y561 859 aa11.25□□□□□ -0.61
VARS-227ENST00000489979 A0A1W2PPH5 198 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 PF4P02776 101 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 RRM2P31350 389 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 SLC25A1P53007 311 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 SLC35A2P78381 396 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 CD69Q07108 199 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 HACD2Q6Y1H2 254 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 THAP5Q7Z6K1 395 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 LINC00471Q8N535 108 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 OR5AU1Q8NGC0 362 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 OR4M1Q8NGD0 313 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 OR6N2Q8NGY6 317 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 PYURFQ96I23 114 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 LYZL4Q96KX0 146 aa11.24□□□□□ -0.61
VARS-227ENST00000489979 HIST1H2AAQ96QV6 131 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms