RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 OR51A7Q8NH64 312 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 IGSF21Q96ID5 467 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TECTBQ96PL2 329 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TNFRSF13CQ96RJ3 184 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 PRRX2Q99811 253 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 PYGO2Q9BRQ0 406 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 CABLES2Q9BTV7 478 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 NMNAT2Q9BZQ4 307 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 SPATC1LQ9H0A9 340 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 GPR35Q9HC97 309 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 ADAP2Q9NPF8 381 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 C20orf141Q9NUB4 165 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 PRR13Q9NZ81 148 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 GSKIPQ9P0R6 139 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 KIAA1456Q9P272 454 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 HSPB7Q9UBY9 170 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 SERGEFQ9UGK8 458 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 ADAM29Q9UKF5 820 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 IKZF2Q9UKS7 526 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 MED31Q9Y3C7 131 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 KCNE3Q9Y6H6 103 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 A0A1B0GU03 582 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 A0A1W2PS29 197 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF860A6NHJ4 632 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF561-AS1K7EIQ3 104 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 K7N7A8 449 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 ETV2O00321 342 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 WNT10BO00744 389 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 SOCS5O75159 536 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF217O75362 1048 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 DEDDO75618 318 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 OR2J2O76002 312 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 KNG1P01042 644 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 MBPP02686 304 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 AKR1A1P14550 325 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 SERPINA2P20848 420 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 APOBEC1P41238 236 aaKnown RBP4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 FHITP49789 147 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 NCBP2P52298 156 aaKnown RBP eCLIP4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF136P52737 540 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 RPS24P62847 133 aaKnown RBP4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 CDK3Q00526 305 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 PMS2P11Q13670 270 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 TESK1Q15569 626 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 HYAL4Q2M3T9 481 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 ACOT6Q3I5F7 207 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 ANKRD55Q3KP44 614 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 CCSMST1Q4G0I0 132 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 EIPR1Q53HC9 387 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 C1orf185Q5T7R7 199 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 SP5Q6BEB4 398 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 TPRG1Q6ZUI0 275 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 FAM214BQ7L5A3 538 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF676Q8N7Q3 588 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 OR2L2Q8NH16 312 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 OR4K13Q8NH42 304 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 PFN4Q8NHR9 129 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 MARCH1Q8TCQ1 289 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM170AQ8WVE7 144 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 CDS1Q92903 461 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM159Q96B96 161 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 MOB3AQ96BX8 217 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 OR7D2Q96RA2 312 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 IMMP2LQ96T52 175 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 VPS25Q9BRG1 176 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 RBKSQ9H477 322 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 KIR3DX1Q9H7L2 352 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 CNTD2Q9H8S5 307 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 LYRM2Q9NU23 88 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 P4HTMQ9NXG6 502 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF443Q9Y2A4 671 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 WDR45Q9Y484 360 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 WSB1Q9Y6I7 421 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 COL6A3P12111 3177 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 KIF26AQ9ULI4 1882 aaPredicted RBP4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 FRMPD3Q5JV73 1810 aa4.22□□□□□ -1.73
SNRNP40-206ENST00000489853 TRAV27A0A087WT01 109 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 CLEC18AA5D8T8 446 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 HSPB2A8KAH6 182 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF705FA8MVS1 300 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 E5RGE8 158 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 NPIPA2E9PIF3 369 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 CYR61O00622 381 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 SCDO00767 359 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 GPR137BO60478 399 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 B3GAT3O94766 335 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 IFNA21P01568 189 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 IGHEP01854 428 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF705DP0CH99 300 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF705BP0CI00 300 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 CTSAP10619 480 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 HIST1H1CP16403 213 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 KLK2P20151 261 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 FUT3P21217 361 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 DTYMKP23919 212 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 HRH1P35367 487 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 PPP1CCP36873 323 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 CRYBB1P53674 252 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 UBE2G2P60604 165 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 PRPS1P60891 318 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms