RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 C1orf123Q9NWV4 160 aa9.31□□□□□ -0.92
CPSF7-212ENST00000489728 BABAM2Q9NXR7 383 aa9.31□□□□□ -0.92
CPSF7-212ENST00000489728 TREM2Q9NZC2 230 aa9.31□□□□□ -0.92
CPSF7-212ENST00000489728 TPRKBQ9Y3C4 175 aa9.31□□□□□ -0.92
CPSF7-212ENST00000489728 PPIAL4AQ9Y536 164 aa9.31□□□□□ -0.92
CPSF7-212ENST00000489728 NSD1Q96L73 2696 aaPredicted RBP9.31□□□□□ -0.92
CPSF7-212ENST00000489728 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.31□□□□□ -0.921e-10■■■■□ 21.5
CPSF7-212ENST00000489728 TRAV38-1A0A0B4J264 116 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 TRAV20A0A0B4J274 112 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 ISPDA4D126 451 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 F5H0A9 414 aaPredicted RBP9.3□□□□□ -0.92
CPSF7-212ENST00000489728 LGALS8O00214 317 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 ZFPL1O95159 310 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 CYB5R3P00387 301 aaPredicted RBP9.3□□□□□ -0.92
CPSF7-212ENST00000489728 SERPINA3P01011 423 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 GRPP07492 148 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 MSMBP08118 114 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 MUC1P15941 1255 aaPredicted RBP9.3□□□□□ -0.92
CPSF7-212ENST00000489728 IL2RGP31785 369 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 THBS2P35442 1172 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 DVL1P1P54792 670 aaPredicted RBP9.3□□□□□ -0.92
CPSF7-212ENST00000489728 BDH1Q02338 343 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 CDK5R1Q15078 307 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 CNN3Q15417 329 aaKnown RBP9.3□□□□□ -0.92
CPSF7-212ENST00000489728 TEX36Q5VZQ5 186 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 WDR82Q6UXN9 313 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 DCDC5Q6ZRR9 648 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 AHSA2Q719I0 299 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 ZNF573Q86YE8 665 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 C11orf53Q8IXP5 236 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 ZNF485Q8NCK3 441 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 DNAAF1Q8NEP3 725 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 OR51F2Q8NH61 342 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 C12orf43Q96C57 262 aaKnown RBP9.3□□□□□ -0.92
CPSF7-212ENST00000489728 MSI2Q96DH6 328 aaKnown RBP9.3□□□□□ -0.92
CPSF7-212ENST00000489728 CDCA4Q9BXL8 241 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 OR51I2Q9H344 312 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 PATZ1Q9HBE1 687 aaKnown RBP9.3□□□□□ -0.92
CPSF7-212ENST00000489728 NEK6Q9HC98 313 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 UFSP2Q9NUQ7 469 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 DCAF16Q9NXF7 216 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 MIOXQ9UGB7 285 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 BLOC1S6Q9UL45 172 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 SLC7A11Q9UPY5 501 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 ERGIC3Q9Y282 383 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 LRCH1Q9Y2L9 728 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 POLDIP2Q9Y2S7 368 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 PCDHGB5Q9Y5G0 923 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 ABCA1O95477 2261 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 HIVEP2P31629 2446 aa9.3□□□□□ -0.92
CPSF7-212ENST00000489728 PPIAL4CA0A0B4J2A2 164 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 TRBV2A0A0J9YWF9 115 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 hCG_1807616A0A1W2PRN6 198 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 PQLC2LA1A4F0 135 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 A8MV72 311 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-212ENST00000489728 A8MXK9 166 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 SRRM5B3KS81 715 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 ZNF732B4DXR9 585 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 WNT9BO14905 357 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 MYL12BO14950 172 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 OGG1O15527 345 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 ALX3O95076 343 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 MT-ND2P03891 347 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 CD1AP06126 327 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 CDK1P06493 297 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 ACAA1P09110 424 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-212ENST00000489728 ZNF16P17020 682 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-212ENST00000489728 ZNF20P17024 532 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 GATA3P23771 443 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 GPM6AP51674 278 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 WNT4P56705 351 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 SLC35A2P78381 396 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 ODF4Q2M2E3 257 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 C11orf91Q3C1V1 193 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 CEP78Q5JTW2 689 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 RBM48Q5RL73 367 aaKnown RBP9.29□□□□□ -0.92
CPSF7-212ENST00000489728 OR2G6Q5TZ20 316 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 KCTD8Q6ZWB6 473 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 MOB3CQ70IA8 216 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 NLRC3Q7RTR2 1065 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 GLCCI1Q86VQ1 547 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 GCSAMQ8N6F7 178 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 SCCPDHQ8NBX0 429 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 OR13C3Q8NGS6 347 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 THRSPQ92748 146 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 SPSB1Q96BD6 273 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 SMIM19Q96E16 107 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 MND1Q9BWT6 205 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 DNTTIP1Q9H147 329 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 DUSP21Q9H596 190 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 NARFLQ9H6Q4 476 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 PPP1R3EQ9H7J1 279 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 TMEM165Q9HC07 324 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 ERVK-18Q9QC07 812 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 KCNS2Q9ULS6 477 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 PCDHB10Q9UN67 800 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 POLR3KQ9Y2Y1 108 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-212ENST00000489728 CSPG4Q6UVK1 2322 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 TLN2Q9Y4G6 2542 aa9.29□□□□□ -0.92
CPSF7-212ENST00000489728 IGHV3-64DA0A0J9YX35 117 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms