RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 GPM6AP51674 278 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 SNRPGP62308 76 aaKnown RBP11.24□□□□□ -0.61
LMO4-203ENST00000489303 ACTC1P68032 377 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 ACTA1P68133 377 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 OCLNQ16625 522 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 C11orf91Q3C1V1 193 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 CEP78Q5JTW2 689 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 SLC25A30Q5SVS4 291 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 ZNF684Q5T5D7 378 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 PLCXD3Q63HM9 321 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 ZNF841Q6ZN19 808 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 DOK3Q7L591 496 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 KRT74Q7RTS7 529 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 FAM90A1Q86YD7 464 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 SCCPDHQ8NBX0 429 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 ZNF671Q8TAW3 534 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 ZFAND2BQ8WV99 257 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 HPSE2Q8WWQ2 592 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 RPL3LQ92901 407 aaKnown RBP11.24□□□□□ -0.61
LMO4-203ENST00000489303 PPP1R14AQ96A00 147 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 MRPL48Q96GC5 212 aaKnown RBP11.24□□□□□ -0.61
LMO4-203ENST00000489303 Q96MT0 163 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 KAAG1Q9UBP8 84 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 PCDHGB1Q9Y5G3 927 aa11.24□□□□□ -0.61
LMO4-203ENST00000489303 A0A1B0GVI7 797 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 NKX6-3A6NJ46 265 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 SRRM5B3KS81 715 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 TRIM77I1YAP6 450 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 P2RY10O00398 339 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 ENTPD6O75354 484 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 SRSF10O75494 262 aaKnown RBP11.23□□□□□ -0.61
LMO4-203ENST00000489303 ECDO95905 644 aaPredicted RBP11.23□□□□□ -0.61
LMO4-203ENST00000489303 FSHBP01225 129 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 FAHP16930 419 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 HILS1P60008 231 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 HOXA4Q00056 320 aaPredicted RBP11.23□□□□□ -0.61
LMO4-203ENST00000489303 PAX2Q02962 417 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 FAM76BQ5HYJ3 339 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 CLVS2Q5SYC1 327 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 SSX6Q7RTT6 188 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 KCTD20Q7Z5Y7 419 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 PNLDC1Q8NA58 520 aaKnown RBP11.23□□□□□ -0.61
LMO4-203ENST00000489303 CCDC54Q8NEL0 328 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 RNFT2Q96EX2 444 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 SLC6A7Q99884 636 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 MS4A7Q9GZW8 240 aaPredicted RBP11.23□□□□□ -0.61
LMO4-203ENST00000489303 PLEKHA1Q9HB21 404 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 CTSZQ9UBR2 303 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 GNG8Q9UK08 70 aa11.23□□□□□ -0.61
LMO4-203ENST00000489303 DAPL1A0PJW8 107 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 DHRS7CA6NNS2 312 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 ARHGAP32A7KAX9 2087 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 DLGAP1O14490 977 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 DVL1O14640 695 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 TNFRSF13BO14836 293 aaPredicted RBP11.22□□□□□ -0.61
LMO4-203ENST00000489303 NDUFB3O43676 98 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 GLRA1P23415 457 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 CFPP27918 469 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 GMFBP60983 142 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 ZSCAN26Q16670 478 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 WDR38Q5JTN6 314 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 ZNF555Q8NEP9 628 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 C22orf15Q8WYQ4 148 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 ST8SIA4Q92187 359 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 UBE2FQ969M7 185 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 UPRTQ96BW1 309 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 MBOAT4Q96T53 435 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 CCL13Q99616 98 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 DNTTIP1Q9H147 329 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 RASSF4Q9H2L5 321 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 OR51I2Q9H344 312 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.22□□□□□ -0.61
LMO4-203ENST00000489303 SLC22A13Q9Y226 551 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 V9GYS6 101 aa11.22□□□□□ -0.61
LMO4-203ENST00000489303 WNK2Q9Y3S1 2297 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 LOC100130705A0A1B0GUX0 176 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 C22orf46C9J442 243 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 AKR7A2O43488 359 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 SYT7O43581 403 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 SERPINA3P01011 423 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 FGF12P61328 243 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 ODF4Q2M2E3 257 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 LRRC10Q5BKY1 277 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 HAGHLQ6PII5 290 aaPredicted RBP11.21□□□□□ -0.61
LMO4-203ENST00000489303 BTN2A1Q7KYR7 527 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 CATSPERDQ86XM0 798 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 ZNF573Q86YE8 665 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 OR14K1Q8NGZ2 314 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 RORBQ92753 470 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 DACT3Q96B18 629 aaPredicted RBP11.21□□□□□ -0.61
LMO4-203ENST00000489303 TMIGD2Q96BF3 282 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 MED30Q96HR3 178 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 SLC29A1Q99808 456 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 GPR173Q9NS66 373 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 NLKQ9UBE8 527 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 SLC7A11Q9UPY5 501 aa11.21□□□□□ -0.61
LMO4-203ENST00000489303 A0A1B0GTI1 187 aa11.2□□□□□ -0.62
LMO4-203ENST00000489303 ZNF879B4DU55 563 aa11.2□□□□□ -0.62
LMO4-203ENST00000489303 GATBO75879 557 aaKnown RBP11.2□□□□□ -0.62
LMO4-203ENST00000489303 UBCP0CG48 685 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms