RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 OR5B21A6NL26 309 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 ZNF670-ZNF695F2Z2N8 137 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 LOC110117498-PIK3R3F6TDL0 507 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 NDUFB3O43676 98 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 MITFO75030 526 aaPredicted RBP11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 HKR1P10072 659 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 CXCR4P61073 352 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 GNG3P63215 75 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 EGR3Q06889 387 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 RIPPLY1Q0D2K3 151 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 POU4F2Q12837 409 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 AWAT1Q58HT5 328 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 LRRC10Q5BKY1 277 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 FAM76BQ5HYJ3 339 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 AADACL4Q5VUY2 407 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 ZNF322Q6U7Q0 402 aaPredicted RBP11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 KRT74Q7RTS7 529 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 SLC35F2Q8IXU6 374 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 SCCPDHQ8NBX0 429 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 HPSE2Q8WWQ2 592 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 RPL3LQ92901 407 aaKnown RBP11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 WDFY2Q96P53 400 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 TTTY10Q9BZA0 68 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 PPP1R3EQ9H7J1 279 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 ADGRL4Q9HBW9 690 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 GPR84Q9NQS5 396 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 CLN6Q9NWW5 311 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 HAO2Q9NYQ3 351 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 ENPP5Q9UJA9 477 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 RPUSD1Q9UJJ7 312 aaKnown RBP11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 COPS3Q9UNS2 423 aa11.44□□□□□ -0.58
SPTLC1-207ENST00000488921 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 M0R129 80 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 DHRS3O75911 302 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 IGLV3-1P01715 115 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 SFTPBP07988 381 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 MMP9P14780 707 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 EPHA2P29317 976 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 GPM6AP51674 278 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 EFNB1P98172 346 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 LRRC36Q1X8D7 754 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 CEACAM21Q3KPI0 293 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 BCL2L15Q5TBC7 163 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 ATPAF1Q5TC12 328 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 STUMQ69YW2 141 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 BRD3OSQ6XYD6 125 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 CMTM4Q8IZR5 234 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 CBR4Q8N4T8 237 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 OR5A2Q8NGI9 324 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 OR51E1Q8TCB6 317 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 GATAD2BQ8WXI9 593 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 ZDHHC16Q969W1 377 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 FAM71F1Q96KD3 344 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 C1orf147Q96MC9 270 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 DUX5Q96PT3 197 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 IL4I1Q96RQ9 567 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 CCL13Q99616 98 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 GABARAPL3Q9BY60 117 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 RASSF4Q9H2L5 321 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 NOX4Q9NPH5 578 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 NKX1-2Q9UD57 310 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 WARS2Q9UGM6 360 aaKnown RBP11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 GTF2A1LQ9UNN4 478 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 KPTNQ9Y664 436 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 R4GMQ9 66 aa11.43□□□□□ -0.58
SPTLC1-207ENST00000488921 A0A1B0GVI7 797 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 ZNF732B4DXR9 585 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 AKR7A2O43488 359 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 GLRA1P23415 457 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 ALDH3A2P51648 485 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 IL13RA1P78552 427 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 SLC9A3R2Q15599 337 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 CDONQ4KMG0 1287 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 CEP78Q5JTW2 689 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 ZNF684Q5T5D7 378 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 PLCXD3Q63HM9 321 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 LPCAT4Q643R3 524 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 BCDIN3DQ7Z5W3 292 aaKnown RBP11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 FAM216BQ8N7L0 139 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 OR51G2Q8NGK0 314 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 ZNF671Q8TAW3 534 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 MED30Q96HR3 178 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 TBX15Q96SF7 602 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 SIRPDQ9H106 197 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 PRDM13Q9H4Q3 707 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 CNTD2Q9H8S5 307 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 PIGLQ9Y2B2 252 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 SNX5Q9Y5X3 404 aa11.42□□□□□ -0.58
SPTLC1-207ENST00000488921 CENPVL3A0A0U1RRI6 287 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 DHRS7CA6NNS2 312 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 PRR32B1ATL7 298 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 EI24O14681 340 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 CASQ2O14958 399 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 SRSF10O75494 262 aaKnown RBP11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 TTRP02766 147 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 KRT8P05787 483 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 FAHP16930 419 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 TGM4P49221 684 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 CDC42P60953 191 aa11.41□□□□□ -0.58
SPTLC1-207ENST00000488921 GMFBP60983 142 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms