RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.31□□□□□ -2.2
CCDC66-221ENST00000487739 CASQ2O14958 399 aaPredicted RBP1.31□□□□□ -2.2
CCDC66-221ENST00000487739 PSPHP1O15172 72 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 KLHL2O95198 593 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 PTTG1O95997 202 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 IGLV7-43P04211 117 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 FGF4P08620 206 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 MMP7P09237 267 aaPredicted RBP1.31□□□□□ -2.2
CCDC66-221ENST00000487739 TACSTD2P09758 323 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 ZNF35P13682 527 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 HRES1P13985 223 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 TUBG1P23258 451 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 CXCR1P25024 350 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 IL3RAP26951 378 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 CD82P27701 267 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 PAFAH1B2P68402 229 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 TSC22D1Q15714 1073 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 TMEM69Q5SWH9 247 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 STEAP4Q687X5 459 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 TRAM1L1Q8N609 369 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 INO80EQ8NBZ0 244 aaPredicted RBP1.31□□□□□ -2.2
CCDC66-221ENST00000487739 RCN3Q96D15 328 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 MS4A8Q9BY19 250 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 DEFB129Q9H1M3 183 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 PRSS16Q9NQE7 514 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 ZC4H2Q9NQZ6 224 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 TUBG2Q9NRH3 451 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 HEBP1Q9NRV9 189 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 TREX1Q9NSU2 369 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 IL37Q9NZH6 218 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 RAB22AQ9UL26 194 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 NDRG2Q9UN36 371 aaKnown RBP1.31□□□□□ -2.2
CCDC66-221ENST00000487739 ADGRA3Q8IWK6 1321 aa1.31□□□□□ -2.2
CCDC66-221ENST00000487739 MIA3Q5JRA6 1907 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 A0A0B4J2E0 115 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 ZNF99A8MXY4 864 aaPredicted RBP1.3□□□□□ -2.2
CCDC66-221ENST00000487739 FARS2O95363 451 aaKnown RBP1.3□□□□□ -2.2
CCDC66-221ENST00000487739 PTHP01270 115 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 MAS1P04201 325 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 TGM4P49221 684 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 DNAJC3Q13217 504 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 HADHQ16836 314 aaKnown RBP1.3□□□□□ -2.2
CCDC66-221ENST00000487739 C5orf64Q2M2E5 130 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 KLHL40Q2TBA0 621 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 ZNF678Q5SXM1 525 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 Q6ZS52 159 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 PDPNQ86YL7 162 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 CMTM8Q8IZV2 173 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 CNPY4Q8N129 248 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 ZCCHC24Q8N2G6 241 aaKnown RBP1.3□□□□□ -2.2
CCDC66-221ENST00000487739 COMMD1Q8N668 190 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 OR52N1Q8NH53 320 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 ISOC2Q96AB3 205 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 NAPGQ99747 312 aaPredicted RBP1.3□□□□□ -2.2
CCDC66-221ENST00000487739 GABRG3Q99928 467 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 TMEM175Q9BSA9 504 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 MTG1Q9BT17 334 aaPredicted RBP1.3□□□□□ -2.2
CCDC66-221ENST00000487739 C8orf33Q9H7E9 229 aaPredicted RBP1.3□□□□□ -2.2
CCDC66-221ENST00000487739 SND1-IT1Q9HBX3 110 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 ADA2Q9NZK5 511 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 CES1P1Q9UKY3 287 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 PPIL1Q9Y3C6 166 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 OR51B2Q9Y5P1 312 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 TENM1Q9UKZ4 2725 aa1.3□□□□□ -2.2
CCDC66-221ENST00000487739 PLXNB3Q9ULL4 1909 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 SLC22A20A6NK97 555 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 HACD1B0YJ81 288 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 AKR7A2O43488 359 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 CLDN18P56856 261 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 KDSRQ06136 332 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 IHHQ14623 411 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 DEFB134Q4QY38 66 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 HHATQ5VTY9 493 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 MORN3Q6PF18 240 aaPredicted RBP1.29□□□□□ -2.2
CCDC66-221ENST00000487739 SMARCD3Q6STE5 483 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 NDUFAF7Q7L592 441 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 WDR31Q8NA23 367 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 SLC26A10Q8NG04 563 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 ZNF420Q8TAQ5 688 aaPredicted RBP1.29□□□□□ -2.2
CCDC66-221ENST00000487739 Q96MT0 163 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 PDCD1LG2Q9BQ51 273 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 OR2AG1Q9H205 316 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 ARV1Q9H2C2 271 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 ZNF492Q9P255 531 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 ZMAT5Q9UDW3 170 aaKnown RBP1.29□□□□□ -2.2
CCDC66-221ENST00000487739 NACADO15069 1562 aa1.29□□□□□ -2.2
CCDC66-221ENST00000487739 IGHV6-1A0A0B4J1U7 121 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 TMEM72A0PK05 275 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 C4orf51C9J302 202 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 H3BN98 237 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 TRDMT1O14717 391 aaKnown RBP1.28□□□□□ -2.2
CCDC66-221ENST00000487739 MYL12BO14950 172 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 HSBP1O75506 76 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 UPK1BO75841 260 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 FSTL3O95633 263 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 NRASP01111 189 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 HRASP01112 189 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 KRASP01116 189 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 IGHV1-46P01743 117 aa1.28□□□□□ -2.2
CCDC66-221ENST00000487739 SEC11BP0C7V7 166 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms