RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 MMP11P24347 488 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 PEBP1P30086 187 aaKnown RBP2.27□□□□□ -2.05
LINC00888-204ENST00000487386 FMO3P31513 532 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 ARRB1P49407 418 aaPredicted RBP2.27□□□□□ -2.05
LINC00888-204ENST00000487386 ERFP50548 548 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 EFNB2P52799 333 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 PPP1CAP62136 330 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 KCNJ2P63252 427 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 HTD2P86397 168 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 SLAQ13239 276 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 DOC2AQ14183 400 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 RCAN2Q14206 197 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 FZD2Q14332 565 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 ARHGAP19Q14CB8 494 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 ELOCQ15369 112 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 TATDN3Q17R31 274 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 RSPO1Q2MKA7 263 aaPredicted RBP2.27□□□□□ -2.05
LINC00888-204ENST00000487386 DEFB116Q30KQ4 102 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 SPIN4Q56A73 249 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 FAM71E1Q6IPT2 247 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 ANGPTL8Q6UXH0 198 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 GKN2Q86XP6 184 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 ZNF573Q86YE8 665 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 TBC1D21Q8IYX1 336 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 LIX1Q8N485 282 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 TMEM105Q8N8V8 129 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 OR2L8Q8NGY9 312 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 ZNF721Q8TF20 911 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 LCN9Q8WX39 176 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 N4BP2L2Q92802 583 aaPredicted RBP2.27□□□□□ -2.05
LINC00888-204ENST00000487386 STMN2Q93045 179 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 PPP3R2Q96LZ3 170 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 TSSK3Q96PN8 268 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 CCT7Q99832 543 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 AIF1LQ9BQI0 150 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 TMEM246Q9BRR3 403 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 EDEM2Q9BV94 578 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 SRMSQ9H3Y6 488 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 KIR3DX1Q9H7L2 352 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 FARSBQ9NSD9 589 aaKnown RBP2.27□□□□□ -2.05
LINC00888-204ENST00000487386 SLC23A2Q9UGH3 650 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 PTBP2Q9UKA9 531 aaKnown RBP2.27□□□□□ -2.05
LINC00888-204ENST00000487386 RAB23Q9ULC3 237 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 SLC22A14Q9Y267 594 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 RNF11Q9Y3C5 154 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 DNAJC15Q9Y5T4 150 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 V9GYQ6 96 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 C5orf42Q9H799 3197 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 ATG2BQ96BY7 2078 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 CEP192Q8TEP8 1941 aa2.27□□□□□ -2.05
LINC00888-204ENST00000487386 SPAG17Q6Q759 2223 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 MYO9BQ13459 2157 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 C15orf38-AP3S2A0A0A6YYH1 394 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 SPTY2D1-AS1A0A0U1RR47 76 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 OR6C74A6NCV1 312 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 TLCD2A6NGC4 264 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 A8MUI8 341 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 PSMD12O00232 456 aaPredicted RBP2.26□□□□□ -2.05
LINC00888-204ENST00000487386 AIM2O14862 343 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 SCAMP2O15127 329 aaKnown RBP2.26□□□□□ -2.05
LINC00888-204ENST00000487386 YKT6O15498 198 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 ERI3O43414 337 aaKnown RBP2.26□□□□□ -2.05
LINC00888-204ENST00000487386 BCAS1O75363 584 aaPredicted RBP2.26□□□□□ -2.05
LINC00888-204ENST00000487386 SEMA3DO95025 777 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 PDYNP01213 254 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 IL3P08700 152 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 COX4I1P13073 169 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 POU2F1P14859 743 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 NQO1P15559 274 aaKnown RBP2.26□□□□□ -2.05
LINC00888-204ENST00000487386 IL1RNP18510 177 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 TCN1P20061 433 aaPredicted RBP2.26□□□□□ -2.05
LINC00888-204ENST00000487386 SERPINB1P30740 379 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 HSD17B2P37059 387 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 MAP3K8P41279 467 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 CSNK1EP49674 416 aaKnown RBP2.26□□□□□ -2.05
LINC00888-204ENST00000487386 CCR8P51685 355 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 GFERP55789 205 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 RPS15AP62244 130 aaKnown RBP2.26□□□□□ -2.05
LINC00888-204ENST00000487386 UBE2IP63279 158 aaKnown RBP2.26□□□□□ -2.05
LINC00888-204ENST00000487386 ACTA1P68133 377 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 ART3Q13508 389 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 ANGPT1Q15389 498 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 TRMT5Q32P41 509 aaKnown RBP2.26□□□□□ -2.05
LINC00888-204ENST00000487386 CDKL4Q5MAI5 379 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 ANKRD26P1Q6NSI1 321 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 GUSBP11Q6P575 273 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 TRIM40Q6P9F5 258 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 SPESP1Q6UW49 350 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 EPGNQ6UW88 154 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 CYHR1Q6ZMK1 362 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 ZNF620Q6ZNG0 422 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 FAM92BQ6ZTR7 304 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 COMMD6Q7Z4G1 85 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 ARPINQ7Z6K5 226 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 SLC38A6Q8IZM9 456 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 DEFB107AQ8IZN7 70 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 PGAM4Q8N0Y7 254 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 TTLQ8NG68 377 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 OR2L3Q8NG85 312 aa2.26□□□□□ -2.05
LINC00888-204ENST00000487386 OR4A15Q8NGL6 344 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms