RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 EDN3P14138 238 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 PMELP40967 661 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 RAD52P43351 418 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 CCL11P51671 97 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 TMEM50BP56557 158 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 RAP2BP61225 183 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 ZNF92Q03936 586 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 PLP2Q04941 152 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 SLC22A6Q4U2R8 563 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 PLAC9Q5JTB6 97 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 NSUN5P2Q63ZY6 315 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 PLXDC2Q6UX71 529 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 IDO2Q6ZQW0 420 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 NCCRP1Q6ZVX7 275 aaPredicted RBP10.38□□□□□ -0.75
PKP4-213ENST00000486254 NUFIP2Q7Z417 695 aaKnown RBP10.38□□□□□ -0.75
PKP4-213ENST00000486254 FTMTQ8N4E7 242 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 BPIFB2Q8N4F0 458 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 CHST4Q8NCG5 386 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 Q8NFD4 153 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 OR1K1Q8NGR3 316 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 OR2AE1Q8NHA4 323 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 BCL2L2Q92843 193 aaPredicted RBP10.38□□□□□ -0.75
PKP4-213ENST00000486254 SARAFQ96BY9 339 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 BORCS8Q96FH0 119 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 POM121L2Q96KW2 1035 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 OR2A7Q96R45 310 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 NICN1Q9BSH3 213 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 LRFN3Q9BTN0 628 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 ZNF436Q9C0F3 470 aaPredicted RBP10.38□□□□□ -0.75
PKP4-213ENST00000486254 DEFB127Q9H1M4 99 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 DLL3Q9NYJ7 618 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 SLC7A11Q9UPY5 501 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 KCNK7Q9Y2U2 307 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 LOC100509620A0A075B734 347 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 TMEM82A0PJX8 343 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 H3BUI4 141 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 RGS11O94810 467 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 IL18BPO95998 194 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 CST4P01036 141 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 AMY2AP04746 511 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 PATE4P0C8F1 98 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 CXCL3P19876 107 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 ATP1B3P54709 279 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 MTCP1P56278 107 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 UBE2MP61081 183 aaKnown RBP10.37□□□□□ -0.75
PKP4-213ENST00000486254 TGFBR3Q03167 851 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 MALLQ13021 153 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 RNF144BQ7Z419 303 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 MED12LQ86YW9 2145 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 SAXO1Q8IYX7 474 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 ASCC1Q8N9N2 400 aaKnown RBP10.37□□□□□ -0.75
PKP4-213ENST00000486254 CAPSLQ8WWF8 208 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 CMBLQ96DG6 245 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 METTL9Q9H1A3 318 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 DLL4Q9NR61 685 aa10.37□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A10PA6NDY2 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A18PA6NE21 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A16PA6NEW6 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A20PA6NIJ5 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A8PA6NJQ4 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A7PA6NKC0 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A22PA8MWA6 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A12PA8MX19 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A5PA8MXJ8 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A23PA8MXZ1 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 SOCS1O15524 211 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 IGHV3-9P01782 118 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A15PP0C7V4 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A13PP0C7W8 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A14PP0C7W9 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM90A24PP0C7X0 464 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 VSIG10L2P0DP72 767 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 GNB3P16520 340 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 ANXA7P20073 488 aaKnown RBP10.36□□□□□ -0.75
PKP4-213ENST00000486254 TAS2R46P59540 309 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 DHODHQ02127 395 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 SF3B4Q15427 424 aaKnown RBP eCLIP10.36□□□□□ -0.752e-6■■■■□ 21.5
PKP4-213ENST00000486254 OR2A2Q6IF42 318 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 LPCAT3Q6P1A2 487 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 C1orf162Q8NEQ5 155 aaPredicted RBP10.36□□□□□ -0.75
PKP4-213ENST00000486254 BEST4Q8NFU0 473 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 OR51T1Q8NGJ9 327 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 OR13C8Q8NGS7 320 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 GRPEL2Q8TAA5 225 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 ZNF431Q8TF32 576 aaPredicted RBP10.36□□□□□ -0.75
PKP4-213ENST00000486254 NUDCD2Q8WVJ2 157 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 SNAPC3Q92966 411 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 WNT2BQ93097 391 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 DACT3Q96B18 629 aaPredicted RBP10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM210AQ96ND0 272 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 TMPRSS13Q9BYE2 586 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 TINAGL1Q9GZM7 467 aaPredicted RBP10.36□□□□□ -0.75
PKP4-213ENST00000486254 ZMAT3Q9HA38 289 aaKnown RBP10.36□□□□□ -0.75
PKP4-213ENST00000486254 GPR173Q9NS66 373 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 FAM86C1Q9NVL1 165 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 MYEF2Q9P2K5 600 aaKnown RBP10.36□□□□□ -0.75
PKP4-213ENST00000486254 ZNF222Q9UK12 451 aa10.36□□□□□ -0.75
PKP4-213ENST00000486254 MEIS3P1A6NDR6 274 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 ATP6V1G1O75348 118 aa10.35□□□□□ -0.75
PKP4-213ENST00000486254 HLA-HP01893 362 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms