RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 NPEPL1Q8NDH3 523 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 OR51F2Q8NH61 342 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 NTMQ9P121 344 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 OPN4Q9UHM6 478 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 ICAM5Q9UMF0 924 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 SLC17A2O00624 439 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 NMBP08949 121 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 PNLIPP16233 465 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 F2RL1P55085 397 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 SNRPEP62304 92 aaKnown RBP9.83□□□□□ -0.84
HDAC6-228ENST00000486227 RAB1AP62820 205 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF85Q03923 595 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 KLF9Q13886 244 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-228ENST00000486227 TMEM211Q6ICI0 200 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 CA5BP1Q8WTZ4 195 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 TGIF2Q9GZN2 237 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 SLC25A31Q9H0C2 315 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 FN3KRPQ9HA64 309 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 RHOFQ9HBH0 211 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 SPACA1Q9HBV2 294 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 PATJQ8NI35 1801 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 A0A1W2PQD3 144 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 NRASP01111 189 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 SMIM6P0DI80 62 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF728P0DKX0 622 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 SFTPCP11686 197 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 OR2B8PP59922 312 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 SNRPNP63162 240 aaKnown RBP9.82□□□□□ -0.84
HDAC6-228ENST00000486227 PJVKQ0ZLH3 352 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 TMEM91Q6ZNR0 172 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 COMTD1Q86VU5 262 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 OR6S1Q8NH40 331 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 RNF128Q8TEB7 428 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 FAM122AQ96E09 287 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF251Q9BRH9 671 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 TMEM218A2RU14 115 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 ALOX5APP20292 161 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 EDDM3BP56851 147 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 HIST2H3PS2Q5TEC6 136 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF770Q6IQ21 691 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-228ENST00000486227 LINC00518Q8N0U6 118 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 LILRB2Q8N423 598 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 TMEM229BQ8NBD8 167 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 HAS2Q92819 552 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 REEP6Q96HR9 211 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 FOXB1Q99853 325 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 OCSTAMPQ9BR26 566 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 C20orf24Q9BUV8 137 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 MMP26Q9NRE1 261 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 SDCBPO00560 298 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-228ENST00000486227 HBE1P02100 147 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF133P52736 654 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-228ENST00000486227 MESTQ5EB52 335 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 OGFOD3Q6PK18 319 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 MAMSTRQ6ZN01 415 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 Q6ZRG5 221 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF721Q8TF20 911 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 TMEM68Q96MH6 324 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 NIPSNAP3BQ9BS92 247 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 PURGQ9UJV8 347 aaKnown RBP9.82□□□□□ -0.84
HDAC6-228ENST00000486227 SMIM10L1P0DMW3 83 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 GLI4P10075 376 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 GNB3P16520 340 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 OPRM1P35372 400 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 OR8G1Q15617 311 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 PHLDA2Q53GA4 152 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 DMKNQ6E0U4 476 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-228ENST00000486227 OIT3Q8WWZ8 545 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 SMIM10Q96HG1 83 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 PRSS27Q9BQR3 290 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 RTL8AQ9BWD3 113 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 HAO2Q9NYQ3 351 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 TP53TG5Q9Y2B4 290 aa9.82□□□□□ -0.84
HDAC6-228ENST00000486227 OR2M5A3KFT3 312 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 FAM221AA4D161 298 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 B4E171 279 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 UMAD1C9J7I0 102 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 GPR31O00270 319 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 OR2C1O95371 312 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 TSPAN7P41732 249 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 ARF1P84077 181 aaKnown RBP9.81□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF718Q3SXZ3 478 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 C19orf48Q6RUI8 117 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 PRSS35Q8N3Z0 413 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 OR1S2Q8NGQ3 325 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 MCHR2Q969V1 340 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 OR5H15A6NDH6 313 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF705FA8MVS1 300 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF705DP0CH99 300 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF705BP0CI00 300 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-228ENST00000486227 TBPP20226 339 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 TAGLN2P37802 199 aaKnown RBP9.81□□□□□ -0.84
HDAC6-228ENST00000486227 SCAND1P57086 179 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 CD200R1LQ6Q8B3 271 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 LRRTM1Q86UE6 522 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 LILRB1Q8NHL6 650 aaPredicted RBP9.81□□□□□ -0.84
HDAC6-228ENST00000486227 MALSU1Q96EH3 234 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 RAC1P63000 192 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 GUCA2AQ02747 115 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 C1orf87Q8N0U7 546 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms