RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 EMC3Q9P0I2 261 aa4.4□□□□□ -1.71
UBR3-210ENST00000484596 FLVCR2Q9UPI3 526 aa4.4□□□□□ -1.71
UBR3-210ENST00000484596 NCOR1O75376 2440 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 NCBP2LA6PVI3 153 aaKnown RBP4.39□□□□□ -1.71
UBR3-210ENST00000484596 PANO1I0J062 215 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 SUPT3HO75486 399 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 CIAO1O76071 339 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 OR5F1O95221 314 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 RPSAP08865 295 aaKnown RBP4.39□□□□□ -1.71
UBR3-210ENST00000484596 ZDHHC11BP0C7U3 371 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 RAB3BP20337 219 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 RAB4AP20338 218 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 MDKP21741 143 aaPredicted RBP4.39□□□□□ -1.71
UBR3-210ENST00000484596 ATP6V0D1P61421 351 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 SARNPP82979 210 aaKnown RBP4.39□□□□□ -1.71
UBR3-210ENST00000484596 SIGLEC14Q08ET2 396 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 RCAN2Q14206 197 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 ANGPT1Q15389 498 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 THEM4Q5T1C6 240 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 TRMT10CQ7L0Y3 403 aaKnown RBP4.39□□□□□ -1.71
UBR3-210ENST00000484596 CBLN2Q8IUK8 224 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 OR52E2Q8NGJ4 325 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 OR13C9Q8NGT0 318 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 ITFG1Q8TB96 612 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 ZNF799Q96GE5 643 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 TMEM175Q9BSA9 504 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 CALN1Q9BXU9 219 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 ENPP5Q9UJA9 477 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 TANC1Q9C0D5 1861 aa4.39□□□□□ -1.71
UBR3-210ENST00000484596 COL4A4P53420 1690 aaPredicted RBP4.38□□□□□ -1.71
UBR3-210ENST00000484596 A6NDN8 102 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 SLC22A20A6NK97 555 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 CENPXA8MT69 81 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 CNMDO75829 334 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 TDP2O95551 362 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 CCL2P13500 99 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 HOXB8P17481 243 aaPredicted RBP4.38□□□□□ -1.71
UBR3-210ENST00000484596 PPP1R2P41236 205 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 CSNK1DP48730 415 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 SKP1P63208 163 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 KDSRQ06136 332 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 QPRTQ15274 297 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 TPRG1LQ5T0D9 272 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 CLEC6AQ6EIG7 209 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 PTRHD1Q6GMV3 140 aaKnown RBP4.38□□□□□ -1.71
UBR3-210ENST00000484596 PPP1R2P3Q6NXS1 205 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 MRPL55Q7Z7F7 128 aaKnown RBP4.38□□□□□ -1.71
UBR3-210ENST00000484596 LRRC6Q86X45 466 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 STPG2Q8N412 459 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 LRRC20Q8TCA0 184 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 OR51E1Q8TCB6 317 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 TCP10LQ8TDR4 215 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 TNFRSF14Q92956 283 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 CREB3L1Q96BA8 519 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 ZNF317Q96PQ6 595 aaPredicted RBP4.38□□□□□ -1.71
UBR3-210ENST00000484596 NAA50Q9GZZ1 169 aaKnown RBP4.38□□□□□ -1.71
UBR3-210ENST00000484596 PATZ1Q9HBE1 687 aaKnown RBP4.38□□□□□ -1.71
UBR3-210ENST00000484596 TP53TG5Q9Y2B4 290 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 DENND4AQ7Z401 1863 aa4.38□□□□□ -1.71
UBR3-210ENST00000484596 MYO9BQ13459 2157 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 WDR87Q6ZQQ6 2873 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 DCHS1Q96JQ0 3298 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 CFAP54Q96N23 3096 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 IGLV1-36A0A0B4J1U3 117 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 TRPC5OSA6NMA1 111 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 SLC19A2O60779 497 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 MPDU1O75352 247 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 LCA5LO95447 670 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 HPRT1P00492 218 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 OXTP01178 125 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 FABP3P05413 133 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 EIF4EP06730 217 aaKnown RBP4.37□□□□□ -1.71
UBR3-210ENST00000484596 ZNF17P17021 662 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 RCC1P18754 421 aaPredicted RBP4.37□□□□□ -1.71
UBR3-210ENST00000484596 ATF6P18850 670 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 WARSP23381 471 aaKnown RBP4.37□□□□□ -1.71
UBR3-210ENST00000484596 CEACAM3P40198 252 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 NMUP48645 174 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 SERPINB8P50452 374 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 RAB7AP51149 207 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 BASP1P80723 227 aaKnown RBP4.37□□□□□ -1.71
UBR3-210ENST00000484596 HMGCS1Q01581 520 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 PON2Q15165 354 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 TMEM183BQ1AE95 376 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 C6orf183Q5T699 404 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 HORMAD1Q86X24 394 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 LRRC8AQ8IWT6 810 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 TMEM183AQ8IXX5 376 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 LRRC34Q8IZ02 419 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 ARHGAP18Q8N392 663 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 BLOC1S5Q8TDH9 187 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 RPEQ96AT9 228 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 TM6SF2Q9BZW4 377 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 LRRC19Q9H756 370 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 UBE2ZQ9H832 354 aaPredicted RBP4.37□□□□□ -1.71
UBR3-210ENST00000484596 CD84Q9UIB8 345 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 RBMX2Q9Y388 322 aaKnown RBP4.37□□□□□ -1.71
UBR3-210ENST00000484596 SCN2AQ99250 2005 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 FRYLO94915 3013 aa4.37□□□□□ -1.71
UBR3-210ENST00000484596 NOTCH2Q04721 2471 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms