RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 MED21Q13503 144 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 RIPK1Q13546 671 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 GALEQ14376 348 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 CDONQ4KMG0 1287 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 TP53I3Q53FA7 332 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 SPRNQ5BIV9 151 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 AVPI1Q5T686 147 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 DOK3Q7L591 496 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 SSX6Q7RTT6 188 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 LHFPL3Q86UP9 236 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 MOGAT3Q86VF5 341 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 LRRC28Q86X40 367 aaPredicted RBP7.5□□□□□ -1.21
COL8A1-207ENST00000483969 RFLNBQ8N5W9 214 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 DTX3Q8N9I9 347 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 SEMA6DQ8NFY4 1073 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 CLDND2Q8NHS1 167 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 OR51E1Q8TCB6 317 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 HAVCR2Q8TDQ0 301 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 APH1BQ8WW43 257 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 PIGCQ92535 297 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 RAB39BQ96DA2 213 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 FAM71F1Q96KD3 344 aaPredicted RBP7.5□□□□□ -1.21
COL8A1-207ENST00000483969 LYZL4Q96KX0 146 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 FGF20Q9NP95 211 aaPredicted RBP7.5□□□□□ -1.21
COL8A1-207ENST00000483969 G6PC2Q9NQR9 355 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 GPR84Q9NQS5 396 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 YAE1D1Q9NRH1 226 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 CHCHD3Q9NX63 227 aaKnown RBP7.5□□□□□ -1.21
COL8A1-207ENST00000483969 RHBDD3Q9Y3P4 386 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 WIPI2Q9Y4P8 454 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 SPG11Q96JI7 2443 aa7.5□□□□□ -1.21
COL8A1-207ENST00000483969 CREBBPQ92793 2442 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 PRRC2AP48634 2157 aaKnown RBP7.49□□□□□ -1.21
COL8A1-207ENST00000483969 PPIAL4EA0A075B759 164 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 ZNF816-ZNF321PA0A0X1KG74 233 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 A0A1B0GVI7 797 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 ISPDA4D126 451 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 ZNF850A8MQ14 1090 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 A8MV72 311 aaPredicted RBP7.49□□□□□ -1.21
COL8A1-207ENST00000483969 B4DSR2 109 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 PPIAL4DF5H284 164 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 FAM20BO75063 409 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 WBP4O75554 376 aaKnown RBP7.49□□□□□ -1.21
COL8A1-207ENST00000483969 DHRS3O75911 302 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 FSTL3O95633 263 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 PTBP3O95758 552 aaKnown RBP7.49□□□□□ -1.21
COL8A1-207ENST00000483969 CLIC3O95833 236 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 TGFAP01135 160 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 IGLV3-1P01715 115 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 TTRP02766 147 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 PPIAL4FP0DN26 164 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 IGHV4-31P0DP07 118 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 ANOS1P23352 680 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 CDH15P55291 814 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 CSNK2BP67870 215 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 MFGE8Q08431 387 aaPredicted RBP7.49□□□□□ -1.21
COL8A1-207ENST00000483969 PRDX4Q13162 271 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 TMEM155Q4W5P6 130 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 TMEM244Q5VVB8 128 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 Q71RC1 249 aaPredicted RBP7.49□□□□□ -1.21
COL8A1-207ENST00000483969 KRT74Q7RTS7 529 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 CATSPERDQ86XM0 798 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 SYS1Q8N2H4 156 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 MUC20Q8N307 709 aaPredicted RBP7.49□□□□□ -1.21
COL8A1-207ENST00000483969 SPICQ8N5J4 248 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 OR52I1Q8NGK6 324 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 ZNF420Q8TAQ5 688 aaPredicted RBP7.49□□□□□ -1.21
COL8A1-207ENST00000483969 Q8TCH9 128 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 RORBQ92753 470 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 TFAP2CQ92754 450 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 RNF170Q96K19 258 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 GAL3ST1Q99999 423 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 RTL8AQ9BWD3 113 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 PAPOLGQ9BWT3 736 aaKnown RBP7.49□□□□□ -1.21
COL8A1-207ENST00000483969 NARFLQ9H6Q4 476 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 UFSP2Q9NUQ7 469 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 RNF7Q9UBF6 113 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 ENPP5Q9UJA9 477 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 SLC22A13Q9Y226 551 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 PPIAL4AQ9Y536 164 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 CSMD1Q96PZ7 3565 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 PRR14LQ5THK1 2151 aa7.49□□□□□ -1.21
COL8A1-207ENST00000483969 IGHV3-64DA0A0J9YX35 117 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 A0A1B0GTI1 187 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 EFCAB10A6NFE3 127 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 A6NLC8 198 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 TMEM210A6NLX4 147 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 DHRS7CA6NNS2 312 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 P2RY10O00398 339 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 SYT7O43581 403 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 DSCAMO60469 2012 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 CYB5R3P00387 301 aaPredicted RBP7.48□□□□□ -1.21
COL8A1-207ENST00000483969 SERPINA3P01011 423 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 HTR1AP08908 422 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 UBCP0CG48 685 aaKnown RBP7.48□□□□□ -1.21
COL8A1-207ENST00000483969 MYL12AP19105 171 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 PCMT1P22061 227 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 ACKR3P25106 362 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 PSMB10P40306 273 aa7.48□□□□□ -1.21
COL8A1-207ENST00000483969 MDH2P40926 338 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms