RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 PTGFRP43088 359 aa22.69■■□□□ 1.22
SHOX2-204ENST00000483851 ID4P47928 161 aa22.69■■□□□ 1.22
SHOX2-204ENST00000483851 UNC119Q13432 240 aa22.69■■□□□ 1.22
SHOX2-204ENST00000483851 ZNF101Q8IZC7 436 aa22.69■■□□□ 1.22
SHOX2-204ENST00000483851 CISD2Q8N5K1 135 aaKnown RBP22.69■■□□□ 1.22
SHOX2-204ENST00000483851 SFXN3Q9BWM7 321 aa22.69■■□□□ 1.22
SHOX2-204ENST00000483851 PRRG2O14669 202 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 CHRM2P08172 466 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 PTHLHP12272 177 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 CBR1P16152 277 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 OR3A4PP47883 348 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 GK2Q14410 553 aaPredicted RBP22.68■■□□□ 1.22
SHOX2-204ENST00000483851 LHFPL2Q6ZUX7 228 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 ZNF610Q8N9Z0 462 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 CSNK2A3Q8NEV1 391 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 OR11H7Q8NGC8 314 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 PIGTQ969N2 578 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 SPACA5Q96QH8 159 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 KDM4BO94953 1096 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 CCL2P13500 99 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 LINC00303Q3SY05 128 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 CRIP3Q6Q6R5 217 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 MRPL21Q7Z2W9 205 aaKnown RBP22.68■■□□□ 1.22
SHOX2-204ENST00000483851 FTMTQ8N4E7 242 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 CST11Q9H112 138 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 C20orf85Q9H1P6 137 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 SLA2Q9H6Q3 261 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 SCPEP1Q9HB40 452 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 GPR173Q9NS66 373 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 TAS2R8Q9NYW2 309 aa22.68■■□□□ 1.22
SHOX2-204ENST00000483851 PSMB1P20618 241 aaKnown RBP22.67■■□□□ 1.22
SHOX2-204ENST00000483851 PRSS3P35030 304 aa22.67■■□□□ 1.22
SHOX2-204ENST00000483851 ST3GAL2Q16842 350 aa22.67■■□□□ 1.22
SHOX2-204ENST00000483851 OR10K2Q6IF99 312 aa22.67■■□□□ 1.22
SHOX2-204ENST00000483851 SLC7A11Q9UPY5 501 aa22.67■■□□□ 1.22
SHOX2-204ENST00000483851 H7C417 338 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 FAM87AP0C7U9 286 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 FUT6P51993 359 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 C1QTNF12Q5T7M4 302 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 SFRP4Q6FHJ7 346 aaPredicted RBP22.66■■□□□ 1.22
SHOX2-204ENST00000483851 SLC7A5P1Q8MH63 180 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 MS4A3Q96HJ5 214 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 MTFP1Q9UDX5 166 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 STARD10Q9Y365 291 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 SVILO95425 2214 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 RAB27BO00194 218 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 RBBP9O75884 186 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 RBP2P50120 134 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 LAMTOR1Q6IAA8 161 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 FAM169BQ8N8A8 192 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 GIMAP1Q8WWP7 306 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 S100A13Q99584 98 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 EIF3KQ9UBQ5 218 aaKnown RBP22.66■■□□□ 1.22
SHOX2-204ENST00000483851 ZNF835Q9Y2P0 537 aa22.66■■□□□ 1.22
SHOX2-204ENST00000483851 PEX14O75381 377 aa22.65■■□□□ 1.22
SHOX2-204ENST00000483851 CST4P01036 141 aa22.65■■□□□ 1.22
SHOX2-204ENST00000483851 IGKV3-15P01624 115 aa22.65■■□□□ 1.22
SHOX2-204ENST00000483851 WNT5AP41221 380 aa22.65■■□□□ 1.22
SHOX2-204ENST00000483851 MTCP1P56278 107 aa22.65■■□□□ 1.22
SHOX2-204ENST00000483851 RNF144BQ7Z419 303 aa22.65■■□□□ 1.22
SHOX2-204ENST00000483851 WDR31Q8NA23 367 aa22.65■■□□□ 1.22
SHOX2-204ENST00000483851 BORCS8Q96FH0 119 aa22.65■■□□□ 1.22
SHOX2-204ENST00000483851 URM1Q9BTM9 101 aaKnown RBP22.65■■□□□ 1.22
SHOX2-204ENST00000483851 OPN3Q9H1Y3 402 aaPredicted RBP22.65■■□□□ 1.22
SHOX2-204ENST00000483851 SPTBN4Q9H254 2564 aa22.65■■□□□ 1.22
SHOX2-204ENST00000483851 INTS1Q8N201 2190 aaKnown RBP22.65■■□□□ 1.22
SHOX2-204ENST00000483851 SMLR1H3BR10 107 aa22.64■■□□□ 1.22
SHOX2-204ENST00000483851 CXorf67Q86X51 503 aaPredicted RBP22.64■■□□□ 1.22
SHOX2-204ENST00000483851 PIAS4Q8N2W9 510 aaPredicted RBP22.64■■□□□ 1.22
SHOX2-204ENST00000483851 NPRL2Q8WTW4 380 aa22.64■■□□□ 1.22
SHOX2-204ENST00000483851 TNFAIP8L1Q8WVP5 186 aa22.64■■□□□ 1.22
SHOX2-204ENST00000483851 AMDHD2Q9Y303 409 aa22.64■■□□□ 1.22
SHOX2-204ENST00000483851 MGAQ8IWI9 3026 aa22.64■■□□□ 1.22
SHOX2-204ENST00000483851 CDC14BO60729 498 aa22.64■■□□□ 1.21
SHOX2-204ENST00000483851 NGFP01138 241 aa22.64■■□□□ 1.21
SHOX2-204ENST00000483851 SULT1A3P0DMM9 295 aa22.64■■□□□ 1.21
SHOX2-204ENST00000483851 SULT1A4P0DMN0 295 aa22.64■■□□□ 1.21
SHOX2-204ENST00000483851 ZP1P60852 638 aa22.64■■□□□ 1.21
SHOX2-204ENST00000483851 SEZ6L2Q6UXD5 910 aa22.64■■□□□ 1.21
SHOX2-204ENST00000483851 NAXEQ8NCW5 288 aa22.64■■□□□ 1.21
SHOX2-204ENST00000483851 GPX8Q8TED1 209 aa22.64■■□□□ 1.21
SHOX2-204ENST00000483851 SNRNP40Q96DI7 357 aaKnown RBP22.64■■□□□ 1.21
SHOX2-204ENST00000483851 TMEM59Q9BXS4 323 aa22.64■■□□□ 1.21
SHOX2-204ENST00000483851 LPAR5Q9H1C0 372 aa22.64■■□□□ 1.21
SHOX2-204ENST00000483851 CDH20Q9HBT6 801 aa22.64■■□□□ 1.21
SHOX2-204ENST00000483851 MYEF2Q9P2K5 600 aaKnown RBP22.64■■□□□ 1.21
SHOX2-204ENST00000483851 GLI4P10075 376 aa22.63■■□□□ 1.21
SHOX2-204ENST00000483851 ATP1B3P54709 279 aa22.63■■□□□ 1.21
SHOX2-204ENST00000483851 GFRALQ6UXV0 394 aa22.63■■□□□ 1.21
SHOX2-204ENST00000483851 BHLHA15Q7RTS1 189 aaPredicted RBP22.63■■□□□ 1.21
SHOX2-204ENST00000483851 OR56B2PQ8NGI1 322 aa22.63■■□□□ 1.21
SHOX2-204ENST00000483851 GON7Q9BXV9 100 aa22.63■■□□□ 1.21
SHOX2-204ENST00000483851 PTTG3PQ9NZH4 202 aa22.63■■□□□ 1.21
SHOX2-204ENST00000483851 PRAF2O60831 178 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 MELTFP08582 738 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 CXCL3P19876 107 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 MECP2P51608 486 aaKnown RBP22.62■■□□□ 1.21
SHOX2-204ENST00000483851 ACTBP60709 375 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 ACTG1P63261 375 aa22.62■■□□□ 1.21
SHOX2-204ENST00000483851 ASCL4Q6XD76 172 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms