RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 CUTCQ9NTM9 273 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 GAR1Q9NY12 217 aaKnown RBP12.63□□□□□ -0.39
COL9A2-207ENST00000482722 HDGFL3Q9Y3E1 203 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 C10orf142B7Z368 130 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 K7EPK0 472 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 ZNF354AO60765 605 aaPredicted RBP12.63□□□□□ -0.39
COL9A2-207ENST00000482722 OR2C1O95371 312 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 IGLV3-19P01714 112 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 BGLAPP02818 100 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 OR13C7P0DN81 318 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 GP1BBP13224 206 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 NDUFB7P17568 137 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 IL11P20809 199 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 ARL4DP49703 201 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 TMEM33P57088 247 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 UNQ6494/PRO21346Q6UXR6 183 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 MAMDC2Q7Z304 686 aaPredicted RBP12.63□□□□□ -0.39
COL9A2-207ENST00000482722 FAM71E2Q8N5Q1 922 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 GPR119Q8TDV5 335 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 THAP3Q8WTV1 239 aaPredicted RBP12.63□□□□□ -0.39
COL9A2-207ENST00000482722 S100PBPQ96BU1 408 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 YPEL4Q96NS1 127 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 CDX2Q99626 313 aaPredicted RBP12.63□□□□□ -0.39
COL9A2-207ENST00000482722 FBXO7Q9Y3I1 522 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 R4GMQ9 66 aa12.63□□□□□ -0.39
COL9A2-207ENST00000482722 TMEM131Q92545 1883 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 TRAV36DV7A0A075B6V5 113 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 SRSF10O75494 262 aaKnown RBP12.62□□□□□ -0.39
COL9A2-207ENST00000482722 JTBO76095 146 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 GLRA1P23415 457 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 ZNF101Q8IZC7 436 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 TMEM104Q8NE00 496 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 OR10D4PQ8NGN7 298 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 G6PC2Q9NQR9 355 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 GFOD1Q9NXC2 390 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 DOK5Q9P104 306 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 MMP24Q9Y5R2 645 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 FRYQ5TBA9 3013 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 ZNF217O75362 1048 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 EFNA3P52797 238 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 C9orf40Q8IXQ3 194 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 PNLDC1Q8NA58 520 aaKnown RBP12.62□□□□□ -0.39
COL9A2-207ENST00000482722 ST7LQ8TDW4 575 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 MR1Q95460 341 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 ADAT3Q96EY9 351 aaPredicted RBP12.62□□□□□ -0.39
COL9A2-207ENST00000482722 GNRHR2Q96P88 292 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 GPR27Q9NS67 375 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 PARPBPQ9NWS1 579 aa12.62□□□□□ -0.39
COL9A2-207ENST00000482722 TMED7-TICAM2A0A0A6YYA0 188 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 IGHV3-20A0A0C4DH32 117 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 A0A1W2PP11 408 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 MED19A0JLT2 244 aaPredicted RBP12.61□□□□□ -0.39
COL9A2-207ENST00000482722 H0YIG0 161 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 SDCBPO00560 298 aaPredicted RBP12.61□□□□□ -0.39
COL9A2-207ENST00000482722 GAPDHP04406 335 aaKnown RBP12.61□□□□□ -0.39
COL9A2-207ENST00000482722 MAS1LP35410 378 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 RBP2P50120 134 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 FAM3AP98173 230 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 CFHR1Q03591 330 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 WDFY1Q8IWB7 410 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 MAFIPQ8WZ33 124 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 CNTNAP3Q9BZ76 1288 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 PRO3102Q9H379 93 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 BANF2Q9H503 90 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 SDHAF3Q9NRP4 125 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 FAM212BQ9NTI7 297 aaPredicted RBP12.61□□□□□ -0.39
COL9A2-207ENST00000482722 A0A0A6YYD4 124 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 A0A1B0GV50 99 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 BLACEA4D250 179 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 FRG2CA6NGY1 282 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 C1QL1O75973 258 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 DDAH2O95865 285 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 HIST1H1BP16401 226 aaKnown RBP12.61□□□□□ -0.39
COL9A2-207ENST00000482722 GABRA4P48169 554 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 EMP2P54851 167 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 RAP1AP62834 184 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 GLO1Q04760 184 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 ZNF721Q8TF20 911 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 ERGIC1Q969X5 290 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 ADIPOR1Q96A54 375 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 BSCL2Q96G97 398 aaPredicted RBP12.61□□□□□ -0.39
COL9A2-207ENST00000482722 KCNJ16Q9NPI9 418 aa12.61□□□□□ -0.39
COL9A2-207ENST00000482722 PUS1Q9Y606 427 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL9A2-207ENST00000482722 CEACAM18A8MTB9 384 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 BPNT1O95861 308 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 RPS2P15880 293 aaKnown RBP12.6□□□□□ -0.39
COL9A2-207ENST00000482722 ZNF823P16415 610 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 BTF3P20290 206 aaKnown RBP12.6□□□□□ -0.39
COL9A2-207ENST00000482722 FPR2P25090 351 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 UCP2P55851 309 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 VAX1Q5SQQ9 334 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.6□□□□□ -0.39
COL9A2-207ENST00000482722 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.6□□□□□ -0.39
COL9A2-207ENST00000482722 SLC25A45Q8N413 288 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 OR13G1Q8NGZ3 307 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 ZNF519Q8TB69 540 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 CCNL2Q96S94 520 aaPredicted RBP12.6□□□□□ -0.39
COL9A2-207ENST00000482722 AHCTF1Q8WYP5 2266 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 IGKV1D-43A0A0B4J1Z2 117 aa12.6□□□□□ -0.39
COL9A2-207ENST00000482722 SLC31A2O15432 143 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms