RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ONECUT1Q9UBC0 465 aa16.5■□□□□ 0.23
MSH5-215ENST00000482280 WARS2Q9UGM6 360 aaKnown RBP16.5■□□□□ 0.23
MSH5-215ENST00000482280 NUFIP1Q9UHK0 495 aaKnown RBP16.5■□□□□ 0.23
MSH5-215ENST00000482280 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.5■□□□□ 0.23
MSH5-215ENST00000482280 OAZ3Q9UMX2 235 aa16.5■□□□□ 0.23
MSH5-215ENST00000482280 COPS3Q9UNS2 423 aa16.5■□□□□ 0.23
MSH5-215ENST00000482280 PIGLQ9Y2B2 252 aa16.5■□□□□ 0.23
MSH5-215ENST00000482280 FBN3Q75N90 2809 aa16.5■□□□□ 0.23
MSH5-215ENST00000482280 OR5B21A6NL26 309 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 ZNF732B4DXR9 585 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 TNFRSF13BO14836 293 aaPredicted RBP16.49■□□□□ 0.23
MSH5-215ENST00000482280 AKR7A2O43488 359 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 GLRA1P23415 457 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 CDC42P60953 191 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 ARF6P62330 175 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 ZNF684Q5T5D7 378 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 AADACL4Q5VUY2 407 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 CCDC121Q6ZUS5 278 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 BCDIN3DQ7Z5W3 292 aaKnown RBP16.49■□□□□ 0.23
MSH5-215ENST00000482280 C10orf67Q8IYJ2 551 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 OR5T2Q8NGG2 359 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 OR5A2Q8NGI9 324 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 H1FXQ92522 213 aaKnown RBP16.49■□□□□ 0.23
MSH5-215ENST00000482280 RFKQ969G6 155 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 ZNF48Q96MX3 618 aaPredicted RBP16.49■□□□□ 0.23
MSH5-215ENST00000482280 DNTTIP1Q9H147 329 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 ADGRL4Q9HBW9 690 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 SNTG1Q9NSN8 517 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 IMPAD1Q9NX62 359 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 RPUSD1Q9UJJ7 312 aaKnown RBP16.49■□□□□ 0.23
MSH5-215ENST00000482280 SNX5Q9Y5X3 404 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 R4GMQ9 66 aa16.49■□□□□ 0.23
MSH5-215ENST00000482280 SAC3D1A6NKF1 404 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 CLDN34H7C241 214 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 DHRS3O75911 302 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 CRYBA1P05813 215 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 SFTPBP07988 381 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 RNASE1P07998 156 aaKnown RBP16.48■□□□□ 0.23
MSH5-215ENST00000482280 HKR1P10072 659 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 IL13RA1P78552 427 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 AWAT1Q58HT5 328 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 FAM216BQ8N7L0 139 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 YIPF7Q8N8F6 280 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 HPSE2Q8WWQ2 592 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 TMIGD2Q96BF3 282 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 APOL4Q9BPW4 351 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 PLEKHA1Q9HB21 404 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 NOX4Q9NPH5 578 aa16.48■□□□□ 0.23
MSH5-215ENST00000482280 A0A1B0GVI7 797 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 NRASP01111 189 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 FAHP16930 419 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 EPHA2P29317 976 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 GABRA2P47869 451 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 MFGE8Q08431 387 aaPredicted RBP16.47■□□□□ 0.23
MSH5-215ENST00000482280 SLC9A3R2Q15599 337 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 CDONQ4KMG0 1287 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 FAM76BQ5HYJ3 339 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 OR8J1Q8NGP2 316 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 LHX4Q969G2 390 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 RAB3IPQ96QF0 476 aaPredicted RBP16.47■□□□□ 0.23
MSH5-215ENST00000482280 TBX5Q99593 518 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 ADI1Q9BV57 179 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 NLKQ9UBE8 527 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 OR52A1Q9UKL2 312 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 KPTNQ9Y664 436 aa16.47■□□□□ 0.23
MSH5-215ENST00000482280 HOXA3O43365 443 aaPredicted RBP16.46■□□□□ 0.23
MSH5-215ENST00000482280 RPP14O95059 124 aaKnown RBP16.46■□□□□ 0.23
MSH5-215ENST00000482280 OR2T7P0C7T2 308 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 NDUFB7P17568 137 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 HTR1FP30939 366 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 BLMHQ13867 455 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 DEFB112Q30KQ8 113 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 CLVS2Q5SYC1 327 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 ATPAF1Q5TC12 328 aaPredicted RBP16.46■□□□□ 0.23
MSH5-215ENST00000482280 STUMQ69YW2 141 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 HAGHLQ6PII5 290 aaPredicted RBP16.46■□□□□ 0.23
MSH5-215ENST00000482280 FAM220AQ7Z4H9 259 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 ZNF573Q86YE8 665 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 OR10H4Q8NGA5 316 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 OR2T27Q8NH04 317 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 SEH1LQ96EE3 360 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 DMRTB1Q96MA1 342 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 GABARAPL3Q9BY60 117 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 WDR13Q9H1Z4 485 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 OR51I2Q9H344 312 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 ACOXLQ9NUZ1 547 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 SLC25A10Q9UBX3 287 aaPredicted RBP16.46■□□□□ 0.23
MSH5-215ENST00000482280 CAB39Q9Y376 341 aaPredicted RBP16.46■□□□□ 0.23
MSH5-215ENST00000482280 FAM96BQ9Y3D0 163 aa16.46■□□□□ 0.23
MSH5-215ENST00000482280 IGHV1-69DA0A0B4J2H0 117 aa16.45■□□□□ 0.22
MSH5-215ENST00000482280 MDFIC2A0A1B0GVS7 189 aa16.45■□□□□ 0.22
MSH5-215ENST00000482280 A0A1W2PQ09 198 aa16.45■□□□□ 0.22
MSH5-215ENST00000482280 OR2AT4A6NND4 320 aa16.45■□□□□ 0.22
MSH5-215ENST00000482280 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.45■□□□□ 0.22
MSH5-215ENST00000482280 IGHV1-69P01742 117 aa16.45■□□□□ 0.22
MSH5-215ENST00000482280 TTRP02766 147 aa16.45■□□□□ 0.22
MSH5-215ENST00000482280 EFNB1P98172 346 aa16.45■□□□□ 0.22
MSH5-215ENST00000482280 TMED1Q13445 227 aa16.45■□□□□ 0.22
MSH5-215ENST00000482280 TUSC1Q2TAM9 212 aa16.45■□□□□ 0.22
MSH5-215ENST00000482280 RUSC1-AS1Q66K80 236 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms