RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 H3BUI4 141 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 J3QKU1 62 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 CYB5AP00167 134 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 ACAA1P09110 424 aaPredicted RBP8.69□□□□□ -1.02
USP39-215ENST00000481409 CLEC2LP0C7M8 214 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 RAB6AP20340 208 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 TNFSF4P23510 183 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 MPV17P39210 176 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 MTCP1P56278 107 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 ERVS71-1P61550 626 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 OR8G1Q15617 311 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 ZNF672Q499Z4 452 aaPredicted RBP8.69□□□□□ -1.02
USP39-215ENST00000481409 SPATA46Q5T0L3 261 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 OR2W3Q7Z3T1 314 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 CDH24Q86UP0 819 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 TMEM200AQ86VY9 491 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 NR2C2APQ86WQ0 139 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 LRRC28Q86X40 367 aaPredicted RBP8.69□□□□□ -1.02
USP39-215ENST00000481409 OR52N4Q8NGI2 321 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 OR51A2Q8NGJ7 313 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 OR8S1Q8NH09 359 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 ZNF671Q8TAW3 534 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 TBC1D15Q8TC07 691 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 C15orf40Q8WUR7 153 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 S100ZQ8WXG8 99 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 RAB40AQ8WXH6 277 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 ERGIC1Q969X5 290 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 ITPKCQ96DU7 683 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 MRPS24Q96EL2 167 aaKnown RBP8.69□□□□□ -1.02
USP39-215ENST00000481409 WDFY2Q96P53 400 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 GPER1Q99527 375 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 S100A13Q99584 98 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 GFI1Q99684 422 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 TMUB1Q9BVT8 246 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 PKIBQ9C010 78 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 PLK3Q9H4B4 646 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 GPR173Q9NS66 373 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 IL36GQ9NZH8 169 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 CRIM1Q9NZV1 1036 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 POLDIP2Q9Y2S7 368 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 NBASA2RRP1 2371 aa8.69□□□□□ -1.02
USP39-215ENST00000481409 FAM208BQ5VWN6 2430 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 A0A0A6YYH2 397 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 LOC100289279A0A1B0GTE1 492 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 LRP5LA4QPB2 252 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 A6NJ64 397 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 PTBP3O95758 552 aaKnown RBP8.68□□□□□ -1.02
USP39-215ENST00000481409 APOA1P02647 267 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 NAT2P11245 290 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 BMP4P12644 408 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 PLA2G2AP14555 144 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 ARSBP15848 533 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 PTBP1P26599 531 aaKnown RBP eCLIP8.68□□□□□ -1.02
USP39-215ENST00000481409 LOXP28300 417 aaPredicted RBP8.68□□□□□ -1.02
USP39-215ENST00000481409 THBS2P35442 1172 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 SERPINF1P36955 418 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 CD200P41217 278 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 PTGFRP43088 359 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 MMP15P51511 669 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 OR10A3P58181 314 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 LSAMPQ13449 338 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 ADIPOQQ15848 244 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 METAP1DQ6UB28 335 aaPredicted RBP8.68□□□□□ -1.02
USP39-215ENST00000481409 BAIAP2L2Q6UXY1 529 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 ASCL4Q6XD76 172 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 MKXQ8IYA7 352 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 OR6Q1Q8NGQ2 317 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 KCNG3Q8TAE7 436 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 FAM3DQ96BQ1 224 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 ORAI1Q96D31 301 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 RNF170Q96K19 258 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 TSC22D3Q99576 134 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 ADAT1Q9BUB4 502 aaKnown RBP8.68□□□□□ -1.02
USP39-215ENST00000481409 C6orf62Q9GZU0 229 aaPredicted RBP8.68□□□□□ -1.02
USP39-215ENST00000481409 CST11Q9H112 138 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 CXXC4Q9H2H0 198 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 MS4A5Q9H3V2 200 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 CNTD2Q9H8S5 307 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 LIN7BQ9HAP6 207 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 SMURF1Q9HCE7 757 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 DUSP13Q9UII6 198 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 PMF1-BGLAPU3KQ54 211 aa8.68□□□□□ -1.02
USP39-215ENST00000481409 A6NIN4 97 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 E7EQL1 145 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 IFNL4K9M1U5 179 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 TPD52L2O43399 206 aaKnown RBP8.67□□□□□ -1.02
USP39-215ENST00000481409 NCR1O76036 304 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 CD55P08174 381 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 OR4A8P0C604 315 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 CA6P23280 308 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 MPZP25189 248 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 TALDO1P37837 337 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 ETV6P41212 452 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 SRP9P49458 86 aaKnown RBP8.67□□□□□ -1.02
USP39-215ENST00000481409 ZP1P60852 638 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 ZNF45Q02386 682 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 IL24Q13007 206 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 PDZK1IP1Q13113 114 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 NKPD1Q17RQ9 610 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 PCGF3Q3KNV8 242 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms