RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 MAGEA2P43356 314 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 RIDAP52758 137 aaKnown RBP5.85□□□□□ -1.47
COL17A1-205ENST00000480127 PROK1P58294 105 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 GNG3P63215 75 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 RIPPLY1Q0D2K3 151 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 APOFQ13790 326 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 TAF9Q16594 264 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 SMIM21Q3B7S5 101 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 KRTAP27-1Q3LI81 207 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 DNAL1Q4LDG9 190 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 CEP78Q5JTW2 689 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 ZNF684Q5T5D7 378 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 BCL2L15Q5TBC7 163 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 NCR3LG1Q68D85 454 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 MOB3CQ70IA8 216 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 GALNT4Q8N4A0 578 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 GCSAMQ8N6F7 178 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 RNF133Q8WVZ7 376 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 ASB17Q8WXJ9 295 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 DYRK2Q92630 601 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 C12orf43Q96C57 262 aaKnown RBP5.85□□□□□ -1.47
COL17A1-205ENST00000480127 CLPTM1LQ96KA5 538 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 NKX3-1Q99801 234 aaPredicted RBP5.85□□□□□ -1.47
COL17A1-205ENST00000480127 ADI1Q9BV57 179 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 FAM234AQ9H0X4 552 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 PAPOLBQ9NRJ5 636 aaKnown RBP5.85□□□□□ -1.47
COL17A1-205ENST00000480127 CTSZQ9UBR2 303 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 OR14J1Q9UGF5 321 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 TMEM14AQ9Y6G1 99 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 C5orf63A6NC05 138 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 OR2AT4A6NND4 320 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 ZNF732B4DXR9 585 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 LOC110117498-PIK3R3F6TDL0 507 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 TNFRSF13BO14836 293 aaPredicted RBP5.84□□□□□ -1.47
COL17A1-205ENST00000480127 NPFFO15130 113 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 CYB5AP00167 134 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 OSMP13725 252 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 GABRA5P31644 462 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 OTX1P32242 354 aaPredicted RBP5.84□□□□□ -1.47
COL17A1-205ENST00000480127 PSMA6P60900 246 aaKnown RBP5.84□□□□□ -1.47
COL17A1-205ENST00000480127 RPL15P61313 204 aaKnown RBP5.84□□□□□ -1.47
COL17A1-205ENST00000480127 PRB3Q04118 309 aaPredicted RBP5.84□□□□□ -1.47
COL17A1-205ENST00000480127 C2orf68Q2NKX9 166 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 C11orf91Q3C1V1 193 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 SLC35D3Q5M8T2 416 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 HAGHLQ6PII5 290 aaPredicted RBP5.84□□□□□ -1.47
COL17A1-205ENST00000480127 WDR82Q6UXN9 313 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 ZNF841Q6ZN19 808 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 Q6ZTK2 550 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 ASRGL1Q7L266 308 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 PIGWQ7Z7B1 504 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 ASCC1Q8N9N2 400 aaKnown RBP5.84□□□□□ -1.47
COL17A1-205ENST00000480127 OR8B12Q8NGG6 310 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 OR5D13Q8NGL4 314 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 OR4C13Q8NGP0 309 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 OR5R1Q8NH85 324 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 OTOSQ8NHW6 89 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 LINC01006Q8NI28 216 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 OR51E1Q8TCB6 317 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 NPRL2Q8WTW4 380 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 CANT1Q8WVQ1 401 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 ZNRF4Q8WWF5 429 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 CAPSLQ8WWF8 208 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 SPSB4Q96A44 273 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 SEH1LQ96EE3 360 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 TBX15Q96SF7 602 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 CNN2Q99439 309 aaKnown RBP5.84□□□□□ -1.47
COL17A1-205ENST00000480127 NMNAT2Q9BZQ4 307 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 WDR13Q9H1Z4 485 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 PPA2Q9H2U2 334 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 METTL8Q9H825 291 aaKnown RBP5.84□□□□□ -1.47
COL17A1-205ENST00000480127 RAB18Q9NP72 206 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 ABCB10Q9NRK6 738 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 VNN3Q9NY84 501 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 NLKQ9UBE8 527 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 KAAG1Q9UBP8 84 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 ENOPH1Q9UHY7 261 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 ENPP5Q9UJA9 477 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 SLC7A11Q9UPY5 501 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 PIGLQ9Y2B2 252 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 POLDIP2Q9Y2S7 368 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 SF3B6Q9Y3B4 125 aaKnown RBP5.84□□□□□ -1.47
COL17A1-205ENST00000480127 LRP12Q9Y561 859 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 ORC6Q9Y5N6 252 aa5.84□□□□□ -1.47
COL17A1-205ENST00000480127 NBEAL2Q6ZNJ1 2754 aa5.84□□□□□ -1.48
COL17A1-205ENST00000480127 A0A1B0GW55 424 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 A0A1B0GWJ7 208 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 TCRBV5S2A0A599 114 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 ARRDC5A6NEK1 342 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 OR5B21A6NL26 309 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 AQP12BA6NM10 295 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 ZNF670-ZNF695F2Z2N8 137 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 INMTO95050 263 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 RPP14O95059 124 aaKnown RBP5.83□□□□□ -1.48
COL17A1-205ENST00000480127 SERPINA3P01011 423 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 NRASP01111 189 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 DUX4L2P0CJ85 424 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 DUX4L3P0CJ86 424 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 DUX4L4P0CJ87 422 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 DUX4L5P0CJ88 424 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms