RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 PAN3Q58A45 887 aaKnown RBP3.95□□□□□ -1.78
UPF3A-205ENST00000479712 DEFB121Q5J5C9 76 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 SLC25A25Q6KCM7 469 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 MED27Q6P2C8 311 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 TRIM40Q6P9F5 258 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 TPRA1Q86W33 373 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 CLEC4FQ8N1N0 589 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 KIR3DL3Q8N743 410 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 ZDHHC22Q8N966 263 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 DCAKDQ8WVC6 231 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 KCTD4Q8WVF5 259 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 GTSF1Q8WW33 167 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 IFT81Q8WYA0 676 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 MS4A6EQ96DS6 147 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 CMTM7Q96FZ5 175 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 COQ2Q96H96 371 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 TSNARE1Q96NA8 513 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 MRPL57Q9BQC6 102 aaKnown RBP3.95□□□□□ -1.78
UPF3A-205ENST00000479712 CCDC77Q9BR77 488 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 GON7Q9BXV9 100 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 MS4A8Q9BY19 250 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 MAGT1Q9H0U3 335 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 SLITRK2Q9H156 845 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 LYRM4Q9HD34 91 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 MS4A12Q9NXJ0 267 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 RIMS3Q9UJD0 308 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 STK38LQ9Y2H1 464 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 AK6Q9Y3D8 172 aaKnown RBP3.95□□□□□ -1.78
UPF3A-205ENST00000479712 HECTD4Q9Y4D8 3996 aa3.95□□□□□ -1.78
UPF3A-205ENST00000479712 LOC100131303A0A0U1RQF7 123 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 IQANK1A0A1B0GTG1 560 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 NCF1BA6NI72 391 aaPredicted RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 PCP4L1A6NKN8 68 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 NCF1CA8MVU1 366 aaPredicted RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 SUPT3HB4E1H0 165 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 TRIM49D1C9J1S8 452 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 UBXN8O00124 270 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 PSMD12O00232 456 aaPredicted RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 ERI3O43414 337 aaKnown RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 SMIM24O75264 130 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 SUPT3HO75486 399 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 SEMA3DO95025 777 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 SNX4O95219 450 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 SOD3P08294 240 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 RPS17P08708 135 aaKnown RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 GFAPP14136 432 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 TAC1P20366 129 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 GDF1P27539 372 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 STARP49675 285 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 CEBPDP49716 269 aaPredicted RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 RAB38P57729 211 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 OR4D2P58180 307 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 UBA52P62987 128 aaKnown RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 IGLV3-21P80748 117 aaPredicted RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 MRPS11P82912 194 aaKnown RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 NSDHLQ15738 373 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 C18orf21Q32NC0 220 aaPredicted RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 SFT2D3Q587I9 215 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 ATAD3CQ5T2N8 411 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 KHDRBS2Q5VWX1 349 aaKnown RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 PRSS41Q7RTY9 318 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 LUZP2Q86TE4 346 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 CA13Q8N1Q1 262 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 CADM2Q8N3J6 435 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 KLHL30-AS1Q8NEE0 82 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 OR5D13Q8NGL4 314 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 OR8J1Q8NGP2 316 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 OR13C2Q8NGS9 318 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 OR8K3Q8NH51 312 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 TYMSOSQ8TAI1 123 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 CCDC126Q96EE4 140 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 PELOQ9BRX2 385 aaKnown RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 CENPKQ9BS16 269 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 SHCBP1LQ9BZQ2 653 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 AICDAQ9GZX7 198 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 TRIM45Q9H8W5 580 aaPredicted RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 PSMC3IPQ9P2W1 217 aaPredicted RBP3.94□□□□□ -1.78
UPF3A-205ENST00000479712 PHF11Q9UIL8 331 aa3.94□□□□□ -1.78
UPF3A-205ENST00000479712 DHRS7CA6NNS2 312 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 C4orf51C9J302 202 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 KLRC4-KLRK1H3BQV0 150 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 K7EIL1 84 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 RS1O15537 224 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 B4GALT2O60909 372 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 CTNSO60931 367 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 CDH16O75309 829 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 OTCP00480 354 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 SERPIND1P05546 499 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 RHOXF2BP0C7M4 288 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 IMPDH1P20839 514 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 USF1P22415 310 aaPredicted RBP3.93□□□□□ -1.78
UPF3A-205ENST00000479712 HIST1H1TP22492 207 aaPredicted RBP3.93□□□□□ -1.78
UPF3A-205ENST00000479712 OMGP23515 440 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 GCAP28676 217 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 MDH2P40926 338 aaKnown RBP3.93□□□□□ -1.78
UPF3A-205ENST00000479712 ZNF136P52737 540 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 PKNOX1P55347 436 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 RAB8AP61006 207 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 BTN3A2P78410 334 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 DDX39BQ13838 428 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms