RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 MYL9P24844 172 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 BDKRB2P30411 391 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 KRTAP10-9P60411 292 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 HOXA4Q00056 320 aaPredicted RBP11.12□□□□□ -0.63
CHD3-210ENST00000479080 DDI2Q5TDH0 399 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 PRAMEF6Q5VXH4 476 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 USP43Q70EL4 1123 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 CALHM1Q8IU99 346 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 LURAP1LQ8IV03 231 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 C11orf53Q8IXP5 236 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 OR5D14Q8NGL3 314 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 SLC25A28Q96A46 364 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 C1orf147Q96MC9 270 aaPredicted RBP11.12□□□□□ -0.63
CHD3-210ENST00000479080 FAM192AQ9GZU8 254 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 KCNK15Q9H427 330 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 UBTD1Q9HAC8 227 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 TCF7L1Q9HCS4 588 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 TMEM138Q9NPI0 162 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 TMEM100Q9NV29 134 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 ABCA4P78363 2273 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 NBPF19A0A087WUL8 3843 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 IGKV1-12A0A0C4DH73 117 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 FAM230AA0A1W2PPH8 454 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 B9A039 149 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 SPRY3O43610 288 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 PTBP3O95758 552 aaKnown RBP11.11□□□□□ -0.63
CHD3-210ENST00000479080 IGKV1D-12P01611 117 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 ADH4P08319 380 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 ZNF182P17025 639 aaPredicted RBP11.11□□□□□ -0.63
CHD3-210ENST00000479080 CFPP27918 469 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 PMELP40967 661 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 CD200P41217 278 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 OR3A4PP47883 348 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 ZNF81P51508 661 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 GPM6AP51674 278 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 PPP3R1P63098 170 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 PLA2G7Q13093 441 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 ZNF154Q13106 437 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 CNN3Q15417 329 aaKnown RBP11.11□□□□□ -0.63
CHD3-210ENST00000479080 OR8G1Q15617 311 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 NKPD1Q17RQ9 610 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 CNPY1Q3B7I2 92 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 FAM76BQ5HYJ3 339 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 C1orf100Q5SVJ3 147 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 ZNF787Q6DD87 383 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 C1QL2Q7Z5L3 287 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 TPRA1Q86W33 373 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 ANGPTL5Q86XS5 388 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 TGIF2LYQ8IUE0 185 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 FBXL14Q8N1E6 418 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 OR4D6Q8NGJ1 314 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 OR13G1Q8NGZ3 307 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 SLC25A46Q96AG3 418 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 SPSB1Q96BD6 273 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 DCUN1D5Q9BTE7 237 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 CLEC4MQ9H2X3 399 aaPredicted RBP11.11□□□□□ -0.63
CHD3-210ENST00000479080 OR51I2Q9H344 312 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 TPK1Q9H3S4 243 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 CNTD2Q9H8S5 307 aa11.11□□□□□ -0.63
CHD3-210ENST00000479080 PKDREJQ9NTG1 2253 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 NOTOA8MTQ0 251 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 C17orf100A8MU93 164 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 ZNF732B4DXR9 585 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 M0R233 179 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 SYNGR1O43759 233 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 CLDN12P56749 244 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 KISS1Q15726 138 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 MPPED2Q15777 294 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 SFXN4Q6P4A7 337 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 OR2Z1Q8NG97 314 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 OR5A2Q8NGI9 324 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 OR5D18Q8NGL1 313 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 ITLN1Q8WWA0 313 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 NRGNQ92686 78 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 C14orf79Q96F83 325 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 ELMOD3Q96FG2 381 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 CYYR1Q96J86 154 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 RNF170Q96K19 258 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 MEGF10Q96KG7 1140 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 SLIRPQ9GZT3 109 aaKnown RBP11.1□□□□□ -0.63
CHD3-210ENST00000479080 TLNRD1Q9H1K6 362 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 CXXC4Q9H2H0 198 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 LIME1Q9H400 295 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 METTL17Q9H7H0 456 aaPredicted RBP11.1□□□□□ -0.63
CHD3-210ENST00000479080 CBLN4Q9NTU7 201 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 CKLFQ9UBR5 152 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 V9GY05 133 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 DOPEY2Q9Y3R5 2298 aa11.1□□□□□ -0.63
CHD3-210ENST00000479080 OR5B21A6NL26 309 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 ANXA2P2A6NMY6 339 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 IFITM5A6NNB3 132 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 SLC17A2O00624 439 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 SPRY1O43609 319 aaPredicted RBP11.09□□□□□ -0.63
CHD3-210ENST00000479080 NOL3O60936 208 aaKnown RBP11.09□□□□□ -0.63
CHD3-210ENST00000479080 CD55P08174 381 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 HCKP08631 526 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 PRKACBP22694 351 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 FUT6P51993 359 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 GNG3P63215 75 aa11.09□□□□□ -0.63
CHD3-210ENST00000479080 HES5Q5TA89 166 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms