RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 CALHM2Q9HA72 323 aa7.74□□□□□ -1.17
CDHR3-211ENST00000478080 NOP16Q9Y3C1 178 aaKnown RBP7.74□□□□□ -1.17
CDHR3-211ENST00000478080 TTC28Q96AY4 2481 aa7.74□□□□□ -1.17
CDHR3-211ENST00000478080 C21orf140B9A014 251 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 SDCBPO00560 298 aaPredicted RBP7.73□□□□□ -1.17
CDHR3-211ENST00000478080 SHOXO15266 292 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 IFNA6P05013 189 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 NAT2P11245 290 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 CCL2P13500 99 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 PPP3CBP16298 524 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 GABRR1P24046 479 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 CD34P28906 385 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 NPY4RP50391 375 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 MTCP1P56278 107 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 CLDN18P56856 261 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 SEC61A1P61619 476 aaKnown RBP7.73□□□□□ -1.17
CDHR3-211ENST00000478080 DHODHQ02127 395 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 BAMBIQ13145 260 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 LRRC37A5PQ49AS3 106 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 DRAM2Q6UX65 266 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 BATF2Q8N1L9 274 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 TMEM251Q8N6I4 163 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 CPEB3Q8NE35 698 aaKnown RBP7.73□□□□□ -1.17
CDHR3-211ENST00000478080 OR56B1Q8NGI3 324 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 FNDC9Q8TBE3 224 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 HAS2Q92819 552 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 SLC7A10Q9NS82 523 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 SLC2A8Q9NY64 477 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 PRR13Q9NZ81 148 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 ZNF107Q9UII5 783 aaPredicted RBP7.73□□□□□ -1.17
CDHR3-211ENST00000478080 PLEKHA6Q9Y2H5 1048 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 NOSIPQ9Y314 301 aaKnown RBP7.73□□□□□ -1.17
CDHR3-211ENST00000478080 TRAV14DV4A0A0A6YYC5 116 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 RPS10-NUDT3A0A1W2PQS6 291 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 OR6C6A6NF89 314 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 ZNF587BE7ETH6 402 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 MRPL33O75394 65 aaKnown RBP7.73□□□□□ -1.17
CDHR3-211ENST00000478080 MTRF1O75570 445 aaKnown RBP7.73□□□□□ -1.17
CDHR3-211ENST00000478080 HPNP05981 417 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 TMEM225BP0DP42 221 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 VAMP1P23763 118 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 ZBTB25P24278 435 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 GSK3AP49840 483 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 ZNF92Q03936 586 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 C6orf201Q7Z4U5 140 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 SLC25A42Q86VD7 318 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 IL22RA1Q8N6P7 574 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 OR52H1Q8NGJ2 320 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 PP6455Q8WZ26 134 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 HDHD3Q9BSH5 251 aaPredicted RBP7.73□□□□□ -1.17
CDHR3-211ENST00000478080 URM1Q9BTM9 101 aaKnown RBP7.73□□□□□ -1.17
CDHR3-211ENST00000478080 TMEM9BQ9NQ34 198 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 MRPS18CQ9Y3D5 142 aaKnown RBP7.73□□□□□ -1.17
CDHR3-211ENST00000478080 TIMM10BQ9Y5J6 103 aa7.73□□□□□ -1.17
CDHR3-211ENST00000478080 IGKV1D-8A0A087WSZ0 117 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 FOXI3A8MTJ6 420 aaPredicted RBP7.72□□□□□ -1.17
CDHR3-211ENST00000478080 FAM25EA8MYX2 175 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 KCNAB3O43448 404 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 SCGNO76038 276 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 HTR3BO95264 441 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 GSTP1P09211 210 aaKnown RBP7.72□□□□□ -1.17
CDHR3-211ENST00000478080 M6PRP20645 277 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 CCNOP22674 350 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 PLGLB1Q02325 96 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 SCRN3Q0VDG4 424 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 PABPC1L2AQ5JQF8 200 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 NKAPLQ5M9Q1 402 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 BRICD5Q6PL45 260 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 Q6ZSR3 168 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 TMUB2Q71RG4 321 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 KCTD9Q7L273 389 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 FAM89BQ8N5H3 189 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 S100A13Q99584 98 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 NUDT16L1Q9BRJ7 211 aaKnown RBP7.72□□□□□ -1.17
CDHR3-211ENST00000478080 PECRQ9BY49 303 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 KCNN3Q9UGI6 736 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 DOCK7Q96N67 2140 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 C9orf170A2RU37 121 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 ZNF503-AS2A6NEH8 195 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 B8ZZF3 427 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 I3L521 148 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 EFSO43281 561 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 APOC1P02654 83 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 ZNF806P0C7X5 589 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 EDN3P14138 238 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 IL13RA1P78552 427 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 ARF1P84077 181 aaKnown RBP7.72□□□□□ -1.17
CDHR3-211ENST00000478080 SRSF6Q13247 344 aaKnown RBP7.72□□□□□ -1.17
CDHR3-211ENST00000478080 HLXQ14774 488 aaPredicted RBP7.72□□□□□ -1.17
CDHR3-211ENST00000478080 PDCD1Q15116 288 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 LYG2Q86SG7 212 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 FAM219AQ8IW50 185 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 SPERTQ8NA61 448 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 MARVELD3Q96A59 401 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 TMPRSS13Q9BYE2 586 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 ARL6Q9H0F7 186 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 UBQLN2Q9UHD9 624 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 MCTS1Q9ULC4 181 aaKnown RBP7.72□□□□□ -1.17
CDHR3-211ENST00000478080 LIPGQ9Y5X9 500 aa7.72□□□□□ -1.17
CDHR3-211ENST00000478080 DMXL1Q9Y485 3027 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms