RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 OR13C9Q8NGT0 318 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 TRMT10AQ8TBZ6 339 aaKnown RBP12.99□□□□□ -0.33
SEC13-215ENST00000477547 OR5P3Q8WZ94 311 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 TMEM203Q969S6 136 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 TECTBQ96PL2 329 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 HIST1H2AAQ96QV6 131 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 CXXC4Q9H2H0 198 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 BARX1Q9HBU1 254 aaPredicted RBP12.99□□□□□ -0.33
SEC13-215ENST00000477547 C14orf119Q9NWQ9 140 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 TAS2R4Q9NYW5 299 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 IL19Q9UHD0 177 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 OR5B21A6NL26 309 aa12.98□□□□□ -0.33
SEC13-215ENST00000477547 SERPINA3P01011 423 aa12.98□□□□□ -0.33
SEC13-215ENST00000477547 OCMP0CE72 109 aaPredicted RBP12.98□□□□□ -0.33
SEC13-215ENST00000477547 PAX1P15863 534 aa12.98□□□□□ -0.33
SEC13-215ENST00000477547 TNFRSF1AP19438 455 aa12.98□□□□□ -0.33
SEC13-215ENST00000477547 INSL4Q14641 139 aa12.98□□□□□ -0.33
SEC13-215ENST00000477547 SPRNQ5BIV9 151 aa12.98□□□□□ -0.33
SEC13-215ENST00000477547 PRAMEF6Q5VXH4 476 aa12.98□□□□□ -0.33
SEC13-215ENST00000477547 UTS2BQ765I0 119 aa12.98□□□□□ -0.33
SEC13-215ENST00000477547 DERL3Q96Q80 235 aa12.98□□□□□ -0.33
SEC13-215ENST00000477547 FGF23Q9GZV9 251 aaPredicted RBP12.98□□□□□ -0.33
SEC13-215ENST00000477547 SF3B6Q9Y3B4 125 aaKnown RBP12.98□□□□□ -0.33
SEC13-215ENST00000477547 TRBV5-7A0A0A0MS05 114 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 A6NLC8 198 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 SULT1B1O43704 296 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 JUNBP17275 347 aaPredicted RBP12.97□□□□□ -0.33
SEC13-215ENST00000477547 FSTP19883 344 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 THBS2P35442 1172 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 GPM6AP51674 278 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 PPP3R1P63098 170 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 MAB21L1Q13394 359 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 CEACAM21Q3KPI0 293 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 ACSM3Q53FZ2 586 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 WDR86Q86TI4 376 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 SERPINA12Q8IW75 414 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 CELF2-AS1Q8N7Q2 184 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 ORAI1Q96D31 301 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 RNF170Q96K19 258 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 ZCCHC4Q9H5U6 513 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 CKLFQ9UBR5 152 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 SLC7A11Q9UPY5 501 aa12.97□□□□□ -0.33
SEC13-215ENST00000477547 IGHV1-69-2A0A0G2JMI3 117 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 LOC100289279A0A1B0GTE1 492 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 A0A1W2PPK0 400 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 TMEM210A6NLX4 147 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 ZNF732B4DXR9 585 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 GABRPO00591 440 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 CDC14BO60729 498 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 SC5DO75845 299 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 F12P00748 615 aaPredicted RBP12.96□□□□□ -0.33
SEC13-215ENST00000477547 GRPP07492 148 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 DAOP14920 347 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 ATF1P18846 271 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 AZGP1P25311 298 aaKnown RBP12.96□□□□□ -0.33
SEC13-215ENST00000477547 TGFBR2P37173 567 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 GNG3P63215 75 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 FABP5Q01469 135 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 ZNF154Q13106 437 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 UBE2V2Q15819 145 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 CARTPTQ16568 116 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 FAM27D1Q5T7N8 215 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 ASPHD2Q6ICH7 369 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 Q71RC1 249 aaPredicted RBP12.96□□□□□ -0.33
SEC13-215ENST00000477547 MOGAT3Q86VF5 341 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 LRRC75A-AS1Q8N1F1 130 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 OR5D14Q8NGL3 314 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 SPSB1Q96BD6 273 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 FOXC2Q99958 501 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 NOX4Q9NPH5 578 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 UFSP2Q9NUQ7 469 aa12.96□□□□□ -0.33
SEC13-215ENST00000477547 IGKV1-9A0A0C4DH69 117 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 FAM230AA0A1W2PPH8 454 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 PQLC2LA1A4F0 135 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 LRP5LA4QPB2 252 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 SSX4O60224 188 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 PTBP3O95758 552 aaKnown RBP12.95□□□□□ -0.34
SEC13-215ENST00000477547 HCKP08631 526 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 CD36P16671 472 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 RAB3AP20336 220 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 PRKACBP22694 351 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 GATA4P43694 442 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 MPPED2Q15777 294 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 CEACAM19Q7Z692 300 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 ZNF525Q8N782 197 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 OR1M1Q8NGA1 313 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 OR5A2Q8NGI9 324 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 OR51A2Q8NGJ7 313 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 RDH5Q92781 318 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 BORCS8Q96FH0 119 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 FN3KRPQ9HA64 309 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 NEK6Q9HC98 313 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 MYOZ1Q9NP98 299 aaPredicted RBP12.95□□□□□ -0.34
SEC13-215ENST00000477547 EXOSC4Q9NPD3 245 aaKnown RBP12.95□□□□□ -0.34
SEC13-215ENST00000477547 DLL4Q9NR61 685 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 TREM2Q9NZC2 230 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 STUB1Q9UNE7 303 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 PPP1R3CQ9UQK1 317 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 CACNG2Q9Y698 323 aa12.95□□□□□ -0.34
SEC13-215ENST00000477547 TRAV8-7A0A075B6U6 113 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms