RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 CD8AP01732 235 aa10□□□□□ -0.81
NUP188-205ENST00000477069 SP1P08047 785 aa10□□□□□ -0.81
NUP188-205ENST00000477069 HLA-GP17693 338 aa10□□□□□ -0.81
NUP188-205ENST00000477069 RIPPLY1Q0D2K3 151 aa10□□□□□ -0.81
NUP188-205ENST00000477069 PPP1R1AQ13522 171 aa10□□□□□ -0.81
NUP188-205ENST00000477069 ACTBL2Q562R1 376 aa10□□□□□ -0.81
NUP188-205ENST00000477069 LYG2Q86SG7 212 aa10□□□□□ -0.81
NUP188-205ENST00000477069 GLRX5Q86SX6 157 aa10□□□□□ -0.81
NUP188-205ENST00000477069 PIP4P1Q86T03 277 aa10□□□□□ -0.81
NUP188-205ENST00000477069 RGCCQ9H4X1 137 aa10□□□□□ -0.81
NUP188-205ENST00000477069 RNF122Q9H9V4 155 aa10□□□□□ -0.81
NUP188-205ENST00000477069 BCO1Q9HAY6 547 aa10□□□□□ -0.81
NUP188-205ENST00000477069 GPR179Q6PRD1 2367 aa10□□□□□ -0.81
NUP188-205ENST00000477069 ARHGAP21Q5T5U3 1957 aa10□□□□□ -0.81
NUP188-205ENST00000477069 M0R233 179 aa10□□□□□ -0.81
NUP188-205ENST00000477069 CA11O75493 328 aa10□□□□□ -0.81
NUP188-205ENST00000477069 HLA-AP01891 365 aaKnown RBP10□□□□□ -0.81
NUP188-205ENST00000477069 LCATP04180 440 aa10□□□□□ -0.81
NUP188-205ENST00000477069 EDN3P14138 238 aa10□□□□□ -0.81
NUP188-205ENST00000477069 SERPINA2P20848 420 aa10□□□□□ -0.81
NUP188-205ENST00000477069 CBX5P45973 191 aa10□□□□□ -0.81
NUP188-205ENST00000477069 FAM3AP98173 230 aa10□□□□□ -0.81
NUP188-205ENST00000477069 OR8B8Q15620 311 aa10□□□□□ -0.81
NUP188-205ENST00000477069 CLVS2Q5SYC1 327 aa10□□□□□ -0.81
NUP188-205ENST00000477069 THOC7Q6I9Y2 204 aaKnown RBP10□□□□□ -0.81
NUP188-205ENST00000477069 ASCL4Q6XD76 172 aa10□□□□□ -0.81
NUP188-205ENST00000477069 SUMF1Q8NBK3 374 aa10□□□□□ -0.81
NUP188-205ENST00000477069 CPEB3Q8NE35 698 aaKnown RBP10□□□□□ -0.81
NUP188-205ENST00000477069 SPSB4Q96A44 273 aa10□□□□□ -0.81
NUP188-205ENST00000477069 Q96M66 194 aa10□□□□□ -0.81
NUP188-205ENST00000477069 FER1L6-AS2Q96M78 137 aa10□□□□□ -0.81
NUP188-205ENST00000477069 CLEC4MQ9H2X3 399 aaPredicted RBP10□□□□□ -0.81
NUP188-205ENST00000477069 SLC7A10Q9NS82 523 aa10□□□□□ -0.81
NUP188-205ENST00000477069 ATPIF1Q9UII2 106 aa10□□□□□ -0.81
NUP188-205ENST00000477069 C9orf170A2RU37 121 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 CDK2AP1O14519 115 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 EFSO43281 561 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 MRPL33O75394 65 aaKnown RBP9.99□□□□□ -0.81
NUP188-205ENST00000477069 SRYQ05066 204 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 SPEM2Q0P670 501 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 LPCAT3Q6P1A2 487 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 COLCA1Q6ZS62 124 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 GALNTL5Q7Z4T8 443 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 LHFPL1Q86WI0 220 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 TUSC5Q8IXB3 177 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 ARRDC1Q8N5I2 433 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 ADAD2Q8NCV1 583 aaKnown RBP9.99□□□□□ -0.81
NUP188-205ENST00000477069 MITD1Q8WV92 249 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 C1QTNF5Q9BXJ0 243 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 ZNF724A8MTY0 619 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 MSTNO14793 375 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 GALR2O43603 387 aaPredicted RBP9.99□□□□□ -0.81
NUP188-205ENST00000477069 IFNA7P01567 189 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 LIPCP11150 499 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 CPT2P23786 658 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 CD34P28906 385 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 MEOX1P50221 254 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 ZNF92Q03936 586 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 TRIP6Q15654 476 aaKnown RBP9.99□□□□□ -0.81
NUP188-205ENST00000477069 PABPC1L2AQ5JQF8 200 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 PRDM14Q9GZV8 571 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 MED13Q9UHV7 2174 aa9.99□□□□□ -0.81
NUP188-205ENST00000477069 LOC100509620A0A075B734 347 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 RFPL4AA6NLU0 287 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 SERPINE3A8MV23 424 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 LEUTXA8MZ59 168 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 RFPL4AL1F8VTS6 287 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 L7N2F9 121 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 IGHV3-9P01782 118 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 PPP3CBP16298 524 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 BLVRBP30043 206 aaPredicted RBP9.98□□□□□ -0.81
NUP188-205ENST00000477069 CNN3Q15417 329 aaKnown RBP9.98□□□□□ -0.81
NUP188-205ENST00000477069 CLLU1Q5K131 121 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 PEG10Q86TG7 708 aaKnown RBP9.98□□□□□ -0.81
NUP188-205ENST00000477069 ZFP62Q8NB50 900 aaPredicted RBP9.98□□□□□ -0.81
NUP188-205ENST00000477069 TERB2Q8NHR7 220 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 ZNF230Q9UIE0 474 aaPredicted RBP9.98□□□□□ -0.81
NUP188-205ENST00000477069 KLF13Q9Y2Y9 288 aaPredicted RBP9.98□□□□□ -0.81
NUP188-205ENST00000477069 FIGNL2A6NMB9 653 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 DBX1A6NMT0 343 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 ZNF587BE7ETH6 402 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 ARPC5O15511 151 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 IFNA6P05013 189 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 PRKACBP22694 351 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 MTCP1P56278 107 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 PRSS12P56730 875 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 ARF1P84077 181 aaKnown RBP9.98□□□□□ -0.81
NUP188-205ENST00000477069 PPA1Q15181 289 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 ATP1A1-AS1Q5TC04 95 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 SIGIRRQ6IA17 410 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 C11orf88Q6PI97 169 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 FNDC9Q8TBE3 224 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 UBQLN2Q9UHD9 624 aa9.98□□□□□ -0.81
NUP188-205ENST00000477069 RPA2P15927 270 aa9.97□□□□□ -0.81
NUP188-205ENST00000477069 C4BPBP20851 252 aa9.97□□□□□ -0.81
NUP188-205ENST00000477069 S100A11P31949 105 aa9.97□□□□□ -0.81
NUP188-205ENST00000477069 FOXG1P55316 489 aaPredicted RBP9.97□□□□□ -0.81
NUP188-205ENST00000477069 SOX8P57073 446 aa9.97□□□□□ -0.81
NUP188-205ENST00000477069 HLXQ14774 488 aaPredicted RBP9.97□□□□□ -0.81
NUP188-205ENST00000477069 LHFPL2Q6ZUX7 228 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms