RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SLC16A14Q7RTX9 510 aa14.41□□□□□ -0.1
TMEM53-208ENST00000476724 PPP1R1CQ8WVI7 109 aa14.41□□□□□ -0.1
TMEM53-208ENST00000476724 HAS2Q92819 552 aa14.41□□□□□ -0.1
TMEM53-208ENST00000476724 ZNF799Q96GE5 643 aa14.41□□□□□ -0.1
TMEM53-208ENST00000476724 ARHGAP5-AS1Q96IT6 56 aa14.41□□□□□ -0.1
TMEM53-208ENST00000476724 NARFLQ9H6Q4 476 aa14.41□□□□□ -0.1
TMEM53-208ENST00000476724 GPR132Q9UNW8 380 aa14.41□□□□□ -0.1
TMEM53-208ENST00000476724 DBX1A6NMT0 343 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 SERPINE3A8MV23 424 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 B8ZZF3 427 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 C21orf140B9A014 251 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 LIPCP11150 499 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 VAMP1P23763 118 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 NBL1P41271 181 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 TAS2R46P59540 309 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 CYCSP99999 105 aaKnown RBP14.4□□□□□ -0.1
TMEM53-208ENST00000476724 ACOT7LQ6ZUV0 252 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 ADAD2Q8NCV1 583 aaKnown RBP14.4□□□□□ -0.1
TMEM53-208ENST00000476724 OR5H2Q8NGV7 314 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 THAP6Q8TBB0 222 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 MARCH1Q8TCQ1 289 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 TM2D1Q9BX74 207 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 GPR87Q9BY21 358 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 TMA7Q9Y2S6 64 aaKnown RBP14.4□□□□□ -0.1
TMEM53-208ENST00000476724 A0A0B4J2A0 478 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 ZSCAN5BA6NJL1 495 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 STMND1H3BQB6 276 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 ZP3P21754 424 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 B3GALT5-AS1P59052 145 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 UBE2V2Q15819 145 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 DRAM2Q6UX65 266 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 GPR137CQ8N3F9 429 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 PSMF1Q92530 271 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 SEC22AQ96IW7 307 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 SRXN1Q9BYN0 137 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 SHPKQ9UHJ6 478 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 PIGLQ9Y2B2 252 aa14.4□□□□□ -0.1
TMEM53-208ENST00000476724 MRPS18CQ9Y3D5 142 aaKnown RBP14.4□□□□□ -0.1
TMEM53-208ENST00000476724 PTPRBP23467 1997 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 A0A1W2PP11 408 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 FOXI3A8MTJ6 420 aaPredicted RBP14.39□□□□□ -0.11
TMEM53-208ENST00000476724 SMAD9O15198 467 aaKnown RBP14.39□□□□□ -0.11
TMEM53-208ENST00000476724 SPDEFO95238 335 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 SERPINA7P05543 415 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 CST2P09228 141 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 CPT2P23786 658 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 CARD18P57730 90 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 RAB35Q15286 201 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 NSUN5P2Q63ZY6 315 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 H3F3CQ6NXT2 135 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 JMJD6Q6NYC1 403 aaPredicted RBP14.39□□□□□ -0.11
TMEM53-208ENST00000476724 CRIP3Q6Q6R5 217 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 HSD17B13Q7Z5P4 300 aaPredicted RBP14.39□□□□□ -0.11
TMEM53-208ENST00000476724 ADAMTS17Q8TE56 1095 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 CASTOR1Q8WTX7 329 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 ST8SIA2Q92186 375 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 FBXO17Q96EF6 278 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 MUC6Q6W4X9 2439 aa14.39□□□□□ -0.11
TMEM53-208ENST00000476724 C5orf63A6NC05 138 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 KRBOX1C9JBD0 128 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 CCSO14618 274 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 BCL2L11O43521 198 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 RAD51DO75771 328 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 FCGR2AP12318 317 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 FAHP16930 419 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 FPR2P25090 351 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 OR3A2P47893 321 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 EIF4E3Q8N5X7 224 aaKnown RBP14.38□□□□□ -0.11
TMEM53-208ENST00000476724 OR14L1PQ8NHC6 308 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 PHYHIPLQ96FC7 376 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 CPNE2Q96FN4 548 aaPredicted RBP14.38□□□□□ -0.11
TMEM53-208ENST00000476724 THOC3Q96J01 351 aaKnown RBP14.38□□□□□ -0.11
TMEM53-208ENST00000476724 CXorf58Q96LI9 332 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 NMES1Q9C002 83 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 FN3KRPQ9HA64 309 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 KCNMB2Q9Y691 235 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 NCKAP5O14513 1909 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 FAM25EA8MYX2 175 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 SGCEO43556 437 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 F10P00742 488 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 AMY2BP19961 511 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 CRYGSP22914 178 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 BLVRBP30043 206 aaPredicted RBP14.38□□□□□ -0.11
TMEM53-208ENST00000476724 ATP1B3P54709 279 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 SCRN3Q0VDG4 424 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 TGIF1Q15583 401 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 ACER2Q5QJU3 275 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 KCTD9Q7L273 389 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 PEG10Q86TG7 708 aaKnown RBP14.38□□□□□ -0.11
TMEM53-208ENST00000476724 RTN4RL2Q86UN3 420 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 CPT1CQ8TCG5 803 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 VRK1Q99986 396 aaPredicted RBP14.38□□□□□ -0.11
TMEM53-208ENST00000476724 PECRQ9BY49 303 aa14.38□□□□□ -0.11
TMEM53-208ENST00000476724 A0A0G2JMM0 328 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 A0A1W2PPB8 328 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 A0A1W2PRS3 328 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 KIR3DP1A8MWS1 328 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 A8MXK9 166 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 C1QL2Q7Z5L3 287 aa14.37□□□□□ -0.11
TMEM53-208ENST00000476724 LHFPL1Q86WI0 220 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms