RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 MZT1Q08AG7 82 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 TSPAN31Q12999 210 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 ZNF273Q14593 569 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 CEP78Q5JTW2 689 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 LINC01590Q5TEZ4 76 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 C10orf99Q6UWK7 81 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 ERI1Q8IV48 349 aaKnown RBP9.66□□□□□ -0.86
HDAC6-219ENST00000476625 CD177Q8N6Q3 437 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 OR4S1Q8NGB4 309 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 OR6N2Q8NGY6 317 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 OR2T4Q8NH00 348 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 GNPDA2Q8TDQ7 276 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 PGAM5Q96HS1 289 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 RNF170Q96K19 258 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 MICU1Q9BPX6 476 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 ABHD6Q9BV23 337 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 RTL8AQ9BWD3 113 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 NMNAT2Q9BZQ4 307 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 NPFFR1Q9GZQ6 430 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 RANBP3Q9H6Z4 567 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-219ENST00000476625 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.66□□□□□ -0.86
HDAC6-219ENST00000476625 ABCD2Q9UBJ2 740 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 KLHDC2Q9Y2U9 406 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 SF3B6Q9Y3B4 125 aaKnown RBP9.66□□□□□ -0.86
HDAC6-219ENST00000476625 CDH10Q9Y6N8 788 aa9.66□□□□□ -0.86
HDAC6-219ENST00000476625 XPNPEP2O43895 674 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 PIPP12273 146 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-219ENST00000476625 CD33P20138 364 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 FMO3P31513 532 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 DDOSTP39656 456 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 CAPZA1P52907 286 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 CAV3P56539 151 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 DEFB121Q5J5C9 76 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 TCTEX1D4Q5JR98 221 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 NDUFA11Q86Y39 141 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 OR10Z1Q8NGY1 313 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 PYURFQ96I23 114 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 OPA3Q9H6K4 179 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 TBC1D23Q9NUY8 699 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 VNN3Q9NY84 501 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 SAMD4AQ9UPU9 718 aaKnown RBP9.65□□□□□ -0.86
HDAC6-219ENST00000476625 TCF19Q9Y242 345 aa9.65□□□□□ -0.86
HDAC6-219ENST00000476625 DSCAML1Q8TD84 2053 aa9.65□□□□□ -0.87
HDAC6-219ENST00000476625 TRBV23-1A0A0A0MS06 115 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 A6NDX4 124 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 SH2D7A6NKC9 451 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-219ENST00000476625 IDH3BO43837 385 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 TIPRLO75663 272 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 GASTP01350 101 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 GRB2P62993 217 aaKnown RBP9.64□□□□□ -0.87
HDAC6-219ENST00000476625 BLMHQ13867 455 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 TMEM200BQ69YZ2 307 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 IQCF1Q8N6M8 205 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 OR8B12Q8NGG6 310 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 OR52L1Q8NGH7 329 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 OR4C15Q8NGM1 316 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 MED30Q96HR3 178 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 DMRTB1Q96MA1 342 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 HOPXQ9BPY8 73 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-219ENST00000476625 TSSK6Q9BXA6 273 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 WNT10AQ9GZT5 417 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 FAM234AQ9H0X4 552 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 MUC13Q9H3R2 512 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 AP3M1Q9Y2T2 418 aa9.64□□□□□ -0.87
HDAC6-219ENST00000476625 ANXA2P2A6NMY6 339 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 ZNF732B4DXR9 585 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 SYNGR1O43759 233 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 SELENOFO60613 162 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 FABP3P05413 133 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 OPRL1P41146 370 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 HCCSP53701 268 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 IL5RAQ01344 420 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 CNN3Q15417 329 aaKnown RBP9.63□□□□□ -0.87
HDAC6-219ENST00000476625 C11orf88Q6PI97 169 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 CCDC121Q6ZUS5 278 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 ZDHHC23Q8IYP9 409 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 Q8N2B8 174 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 OR4F17Q8NGA8 305 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 OR5D13Q8NGL4 314 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 RNF133Q8WVZ7 376 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 OTULINQ96BN8 352 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 OR4F4Q96R69 305 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 TTTY10Q9BZA0 68 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 DNTTIP1Q9H147 329 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 OR10A2Q9H208 303 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 OR51I2Q9H344 312 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 EFCAB1Q9HAE3 211 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 LYVE1Q9Y5Y7 322 aa9.63□□□□□ -0.87
HDAC6-219ENST00000476625 RFPL4AA6NLU0 287 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 TMEM210A6NLX4 147 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 RFPL4AL1F8VTS6 287 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 PSMD9O00233 223 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 ARPC2O15144 300 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 CST4P01036 141 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 ARG1P05089 322 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 H2BFMP0C1H6 154 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 CD24P25063 80 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 DLX6P56179 175 aa9.62□□□□□ -0.87
HDAC6-219ENST00000476625 RPL31P62899 125 aaKnown RBP9.62□□□□□ -0.87
HDAC6-219ENST00000476625 EMX1Q04741 257 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms