RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 TMEM246Q9BRR3 403 aa12.11□□□□□ -0.47
ABCF3-211ENST00000475728 JAM3Q9BX67 310 aa12.11□□□□□ -0.47
ABCF3-211ENST00000475728 FGF20Q9NP95 211 aaPredicted RBP12.11□□□□□ -0.47
ABCF3-211ENST00000475728 ERVK13-1Q9NX77 482 aa12.11□□□□□ -0.47
ABCF3-211ENST00000475728 JMJD1CQ15652 2540 aa12.11□□□□□ -0.47
ABCF3-211ENST00000475728 YLPM1P49750 1951 aaKnown RBP12.1□□□□□ -0.47
ABCF3-211ENST00000475728 OOEPA6NGQ2 149 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 A8MXK9 166 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 GATBO75879 557 aaKnown RBP12.1□□□□□ -0.47
ABCF3-211ENST00000475728 ZNF205O95201 554 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 SERPINA3P01011 423 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 WNT2P09544 360 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 MUC1P15941 1255 aaPredicted RBP12.1□□□□□ -0.47
ABCF3-211ENST00000475728 SRD5A1P18405 259 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 MYL12AP19105 171 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 GBX2P52951 348 aaPredicted RBP12.1□□□□□ -0.47
ABCF3-211ENST00000475728 SCGB2A2Q13296 93 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 WDR38Q5JTN6 314 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 FAM201AQ5SY85 155 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 DCAF12L2Q5VW00 463 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 TMEM42Q69YG0 159 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 ZNF826PQ6ZT77 177 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 MOB3CQ70IA8 216 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 WDR86Q86TI4 376 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 LHFPL3Q86UP9 236 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 DEFB108BQ8NET1 73 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 OR14K1Q8NGZ2 314 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 CNIH3Q8TBE1 160 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 LRRC29Q8WV35 223 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 HPSE2Q8WWQ2 592 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 TECTBQ96PL2 329 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 SSBP3Q9BWW4 388 aaPredicted RBP12.1□□□□□ -0.47
ABCF3-211ENST00000475728 NKX1-2Q9UD57 310 aaPredicted RBP12.1□□□□□ -0.47
ABCF3-211ENST00000475728 OR5V1Q9UGF6 321 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 MYRFQ9Y2G1 1151 aa12.1□□□□□ -0.47
ABCF3-211ENST00000475728 POLR3KQ9Y2Y1 108 aaPredicted RBP12.1□□□□□ -0.47
ABCF3-211ENST00000475728 LOC107986453A0A1B0GWG9 222 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 EFCAB10A6NFE3 127 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 ZNF732B4DXR9 585 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 CDIPTO14735 213 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 CLIC3O95833 236 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 LHBP01229 141 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 ISG15P05161 165 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 THBS2P35442 1172 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 SRP14P37108 136 aaKnown RBP12.09□□□□□ -0.47
ABCF3-211ENST00000475728 PSMB10P40306 273 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 PITPNBP48739 271 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 NPY4RP50391 375 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 GPM6AP51674 278 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 GNB2P62879 340 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 CSNK2BP67870 215 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 LCN2P80188 198 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 HNRNPA0Q13151 305 aaKnown RBP12.09□□□□□ -0.47
ABCF3-211ENST00000475728 SMN1Q16637 294 aaKnown RBP12.09□□□□□ -0.47
ABCF3-211ENST00000475728 MICBQ29980 383 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 ODF4Q2M2E3 257 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 CEP78Q5JTW2 689 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 FAHD2BQ6P2I3 314 aaPredicted RBP12.09□□□□□ -0.47
ABCF3-211ENST00000475728 WDR82Q6UXN9 313 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 TMPRSS11AQ6ZMR5 421 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 ZNF573Q86YE8 665 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 C11orf53Q8IXP5 236 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 PRSS35Q8N3Z0 413 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 GCSAMQ8N6F7 178 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 SCCPDHQ8NBX0 429 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 ZNF671Q8TAW3 534 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 C12orf43Q96C57 262 aaKnown RBP12.09□□□□□ -0.47
ABCF3-211ENST00000475728 PELI1Q96FA3 418 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 FAHD2AQ96GK7 314 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 PPP1R3EQ9H7J1 279 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 CHCHD3Q9NX63 227 aaKnown RBP12.09□□□□□ -0.47
ABCF3-211ENST00000475728 SLC7A11Q9UPY5 501 aa12.09□□□□□ -0.47
ABCF3-211ENST00000475728 EXOSC1Q9Y3B2 195 aaKnown RBP12.09□□□□□ -0.47
ABCF3-211ENST00000475728 ANKRD61A6NGH8 418 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 SRRM5B3KS81 715 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 C3orf80F5H4A9 247 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 CCDC159P0C7I6 412 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 CD80P33681 288 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 KIR3DL2P43630 455 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 ALKBH1Q13686 389 aaKnown RBP12.08□□□□□ -0.48
ABCF3-211ENST00000475728 TEX36Q5VZQ5 186 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 SFRP4Q6FHJ7 346 aaPredicted RBP12.08□□□□□ -0.48
ABCF3-211ENST00000475728 ZNF676Q8N7Q3 588 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 PP6455Q8WZ26 134 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 TFAP2CQ92754 450 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 RPL3LQ92901 407 aaKnown RBP12.08□□□□□ -0.48
ABCF3-211ENST00000475728 COMMD4Q9H0A8 199 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 OR51I2Q9H344 312 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 FRRS1LQ9P0K9 344 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 ERVK-18Q9QC07 812 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 DNAJB11Q9UBS4 358 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 CLN8Q9UBY8 286 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 HHLA2Q9UM44 414 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 DIMT1Q9UNQ2 313 aaKnown RBP12.08□□□□□ -0.48
ABCF3-211ENST00000475728 POLDIP2Q9Y2S7 368 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 CAB39Q9Y376 341 aaPredicted RBP12.08□□□□□ -0.48
ABCF3-211ENST00000475728 MALRD1Q5VYJ5 2156 aa12.08□□□□□ -0.48
ABCF3-211ENST00000475728 TMEM212A6NML5 194 aa12.07□□□□□ -0.48
ABCF3-211ENST00000475728 ADAM20O43506 726 aa12.07□□□□□ -0.48
ABCF3-211ENST00000475728 PIPP12273 146 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms