RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 CCDC120Q96HB5 630 aa12.3□□□□□ -0.44
UBXN11-214ENST00000475591 REEP6Q96HR9 211 aa12.3□□□□□ -0.44
UBXN11-214ENST00000475591 SIGLEC12Q96PQ1 595 aa12.3□□□□□ -0.44
UBXN11-214ENST00000475591 HDHD3Q9BSH5 251 aaPredicted RBP12.3□□□□□ -0.44
UBXN11-214ENST00000475591 C5orf66Q9H5L9 145 aa12.3□□□□□ -0.44
UBXN11-214ENST00000475591 NARFLQ9H6Q4 476 aa12.3□□□□□ -0.44
UBXN11-214ENST00000475591 NCOR1O75376 2440 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 SPRY1O43609 319 aaPredicted RBP12.29□□□□□ -0.44
UBXN11-214ENST00000475591 CRYZL1O95825 349 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 LCATP04180 440 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 UBBP0CG47 229 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 RAB35Q15286 201 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 C6orf201Q7Z4U5 140 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 OR13G1Q8NGZ3 307 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 TMEM230Q96A57 120 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 PHB2Q99623 299 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 OCSTAMPQ9BR26 566 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 LRFN1Q9P244 771 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 IGKV1-27A0A075B6S5 117 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 IGKV1D-8A0A087WSZ0 117 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 FAM230AA0A1W2PPH8 454 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 TBPP20226 339 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 HTR5AP47898 357 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 SRYQ05066 204 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 FAM209AQ5JX71 171 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 ABLIM2Q6H8Q1 611 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 C11orf87Q6NUJ2 197 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 RFPL4BQ6ZWI9 263 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 GALNTL5Q7Z4T8 443 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 FAM219AQ8IW50 185 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 RELL2Q8NC24 303 aaPredicted RBP12.29□□□□□ -0.44
UBXN11-214ENST00000475591 SEMA6DQ8NFY4 1073 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 OR1F12Q8NHA8 337 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 SCARB1Q8WTV0 552 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 TAAR9Q96RI9 348 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 SPRY4Q9C004 299 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 KIF25Q9UIL4 384 aa12.29□□□□□ -0.44
UBXN11-214ENST00000475591 DNPH1O43598 174 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 MTRF1O75570 445 aaKnown RBP12.28□□□□□ -0.44
UBXN11-214ENST00000475591 SNU13P55769 128 aaKnown RBP12.28□□□□□ -0.44
UBXN11-214ENST00000475591 GFRA1P56159 465 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 PSG4Q00888 419 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 SLC9A3R2Q15599 337 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 PNLIPRP3Q17RR3 467 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 NKAPLQ5M9Q1 402 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 VAX1Q5SQQ9 334 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 CDCP2Q5VXM1 449 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 OR5H2Q8NGV7 314 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 S100A13Q99584 98 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 FOXB1Q99853 325 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 REG4Q9BYZ8 158 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 MCTS1Q9ULC4 181 aaKnown RBP12.28□□□□□ -0.44
UBXN11-214ENST00000475591 AHCTF1Q8WYP5 2266 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 C13orf42A0A1B0GVH6 325 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 hCG_1807616A0A1W2PRN6 198 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 MSTNO14793 375 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 CST2P09228 141 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 TMEM225BP0DP42 221 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 ALDH3B1P43353 468 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 MTCP1P56278 107 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 SRSF4Q08170 494 aaKnown RBP12.28□□□□□ -0.44
UBXN11-214ENST00000475591 FAM74A1Q5RGS3 127 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 RGS7BPQ6MZT1 257 aaPredicted RBP12.28□□□□□ -0.44
UBXN11-214ENST00000475591 Q6ZSR3 168 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 CSNK2A3Q8NEV1 391 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 OR6K3Q8NGY3 331 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 CPT1CQ8TCG5 803 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 RBPMSQ93062 196 aaKnown RBP12.28□□□□□ -0.44
UBXN11-214ENST00000475591 STRADBQ9C0K7 418 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 WNT5BQ9H1J7 359 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 ZNF701Q9NV72 531 aaPredicted RBP12.28□□□□□ -0.44
UBXN11-214ENST00000475591 COQ3Q9NZJ6 369 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 TNFSF18Q9UNG2 199 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 GPR132Q9UNW8 380 aa12.28□□□□□ -0.44
UBXN11-214ENST00000475591 RNF222A6NCQ9 220 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 NEURL1O76050 574 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 DUS4LO95620 317 aaKnown RBP12.27□□□□□ -0.45
UBXN11-214ENST00000475591 SP9P0CG40 484 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 DLSTP36957 453 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 C9orf135Q5VTT2 229 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 AADACL3Q5VUY0 350 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 LPCAT3Q6P1A2 487 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 DRAM2Q6UX65 266 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 SLC16A14Q7RTX9 510 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 SKA3Q8IX90 412 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 OR52H1Q8NGJ2 320 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 LRRC20Q8TCA0 184 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 ASB13Q8WXK3 278 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 SDHAF2Q9NX18 166 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 PLA2G3Q9NZ20 509 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 EHFQ9NZC4 300 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 COMMD9Q9P000 198 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 FRYQ5TBA9 3013 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 C5orf51A6NDU8 294 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 OR6C6A6NF89 314 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 MPTX1A8MV57 137 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 SHOXO15266 292 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 ADAP1O75689 374 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 SERPINF1P36955 418 aa12.27□□□□□ -0.45
UBXN11-214ENST00000475591 JMJD6Q6NYC1 403 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms