RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 MMP24Q9Y5R2 645 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 TMEM14AQ9Y6G1 99 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 KIF26BQ2KJY2 2108 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 TNRC18O15417 2968 aaPredicted RBP11.5□□□□□ -0.57
CCNL1-216ENST00000475298 IGLV1-36A0A0B4J1U3 117 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 OR5H15A6NDH6 313 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 OR5H1A6NKK0 313 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 UMAD1C9J7I0 102 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 EIF1AYO14602 144 aaKnown RBP11.5□□□□□ -0.57
CCNL1-216ENST00000475298 NUDT21O43809 227 aaKnown RBP11.5□□□□□ -0.57
CCNL1-216ENST00000475298 ADAP1O75689 374 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 OR6A2O95222 327 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 DUS4LO95620 317 aaKnown RBP11.5□□□□□ -0.57
CCNL1-216ENST00000475298 CYB5AP00167 134 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 MBP02144 154 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 HEXBP07686 556 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 ERCC1P07992 297 aaPredicted RBP11.5□□□□□ -0.57
CCNL1-216ENST00000475298 GIMD1P0DJR0 217 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 EIF1AXP47813 144 aaKnown RBP11.5□□□□□ -0.57
CCNL1-216ENST00000475298 FBXW4P57775 412 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 ADAM8P78325 824 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 SLC17A1Q14916 467 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 TMEM268Q5VZI3 342 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 COX15Q7KZN9 410 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 FAM219AQ8IW50 185 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF610Q8N9Z0 462 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 SLC38A9Q8NBW4 561 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 ACBD4Q8NC06 268 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 SLC41A2Q96JW4 573 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 NDUFAF3Q9BU61 184 aa11.5□□□□□ -0.57
CCNL1-216ENST00000475298 ZMAT3Q9HA38 289 aaKnown RBP11.5□□□□□ -0.57
CCNL1-216ENST00000475298 LOC100289279A0A1B0GTE1 492 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 SHISA8B8ZZ34 492 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 PLPP3O14495 311 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 RAB6AP20340 208 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 CX3CR1P49238 355 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 FMODQ06828 376 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 RASGEF1BQ0VAM2 473 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 SQSTM1Q13501 440 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 EIF2B1Q14232 305 aaKnown RBP11.49□□□□□ -0.57
CCNL1-216ENST00000475298 PRSS54Q6PEW0 395 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 HIST2H3AQ71DI3 136 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 NUP54Q7Z3B4 507 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 PRR18Q8N4B5 295 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 PLPP7Q8NBV4 271 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 RAB24Q969Q5 203 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 MCHR2Q969V1 340 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 CDC6Q99741 560 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 COA3Q9Y2R0 106 aaPredicted RBP11.49□□□□□ -0.57
CCNL1-216ENST00000475298 KCNIP3Q9Y2W7 256 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 ADAMTS20P59510 1910 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 A8MVM7 634 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF587BE7ETH6 402 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 SOX1O00570 391 aaPredicted RBP11.49□□□□□ -0.57
CCNL1-216ENST00000475298 DXOO77932 396 aaKnown RBP11.49□□□□□ -0.57
CCNL1-216ENST00000475298 MT-ATP6P00846 226 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 GLB1P16278 677 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 IL2RGP31785 369 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 UCP2P55851 309 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 RAB1AP62820 205 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 GUK1Q16774 197 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 FAM166AQ6J272 317 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 ALKBH2Q6NS38 261 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 GRINAQ7Z429 371 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 ZDHHC22Q8N966 263 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 SEMA6DQ8NFY4 1073 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 OR5R1Q8NH85 324 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 C8orf44Q96CB5 159 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 TXNIPQ9H3M7 391 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 UNKLQ9H9P5 680 aaKnown RBP11.49□□□□□ -0.57
CCNL1-216ENST00000475298 SLC17A5Q9NRA2 495 aa11.49□□□□□ -0.57
CCNL1-216ENST00000475298 PPP1R2P9O14990 202 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 TIAF1O95411 115 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 CSTBP04080 98 aaKnown RBP11.48□□□□□ -0.57
CCNL1-216ENST00000475298 CXCL1P09341 107 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 FABP4P15090 132 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 AKR1C4P17516 323 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 PPA1Q15181 289 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 EIF5AL1Q6IS14 154 aaKnown RBP11.48□□□□□ -0.57
CCNL1-216ENST00000475298 SLC18B1Q6NT16 456 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 FAHD2BQ6P2I3 314 aaPredicted RBP11.48□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF627Q7L945 461 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 ZNF679Q8IYX0 411 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 BEND2Q8NDZ0 799 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 OR51F2Q8NH61 342 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 OR10J5Q8NHC4 309 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 STT3BQ8TCJ2 826 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 FAHD2AQ96GK7 314 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 GNRHR2Q96P88 292 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 ABHD6Q9BV23 337 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 PARP12Q9H0J9 701 aaKnown RBP11.48□□□□□ -0.57
CCNL1-216ENST00000475298 UBE2ZQ9H832 354 aaPredicted RBP11.48□□□□□ -0.57
CCNL1-216ENST00000475298 VDAC3Q9Y277 283 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 TMED3Q9Y3Q3 217 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 AHSA1O95433 338 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 RAB4AP20338 218 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 MIDNQ504T8 468 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 RNF128Q8TEB7 428 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 PRRT1Q99946 306 aa11.48□□□□□ -0.57
CCNL1-216ENST00000475298 SLCO5A1Q9H2Y9 848 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms