RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 KDM3BQ7LBC6 1761 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-212ENST00000473961 COL22A1Q8NFW1 1626 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-212ENST00000473961 RIMBP3Q9UFD9 1639 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 SCN4AP35499 1836 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 NWD1Q149M9 1564 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 LAMB1P07942 1786 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 ANKRD36CQ5JPF3 1778 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 TIAM2Q8IVF5 1701 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 NALCNQ8IZF0 1738 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 FMN2Q9NZ56 1722 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 IGKV1D-13A0A0B4J2D9 117 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 A0A0G2JMP0 313 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 KIR2DL5BA0A0G2JN68 375 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 KIR2DL5BA0A0G2JPC4 375 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 PNMA8CA0A1B0GUJ8 204 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 PRSS37A4D1T9 235 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 SERPINE3A8MV23 424 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 TMX2-CTNND1H3BSU7 103 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 TEX46H3BTG2 121 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 BCKDKO14874 412 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 ZBTB5O15062 677 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 XRCC2O43543 280 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 CALUO43852 315 aaPredicted RBP3□□□□□ -1.93
BRCA1-212ENST00000473961 GMDSO60547 372 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 DPM1O60762 260 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 PSIP1O75475 530 aaKnown RBP3□□□□□ -1.93
BRCA1-212ENST00000473961 SEMA3DO95025 777 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 SNAP29O95721 258 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 INSP01308 110 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 APOC1P02654 83 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 IFNW1P05000 195 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 ARG1P05089 322 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 PCCAP05165 728 aaPredicted RBP3□□□□□ -1.93
BRCA1-212ENST00000473961 BPGMP07738 259 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 IGKV1-13P0DP09 117 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 IL7P13232 177 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 RAB3BP20337 219 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 CD82P27701 267 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 BTCP35070 178 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 HRH1P35367 487 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 VSX2P58304 361 aaPredicted RBP3□□□□□ -1.93
BRCA1-212ENST00000473961 GABARAPL2P60520 117 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 FLI1Q01543 452 aaPredicted RBP3□□□□□ -1.93
BRCA1-212ENST00000473961 SLC25A11Q02978 314 aaKnown RBP3□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF33AQ06730 810 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 INCA1Q0VD86 236 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 NEDD8Q15843 81 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 TPTE2P1Q5T6R2 138 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 PDPK2PQ6A1A2 396 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 ULK3Q6PHR2 472 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 MBOAT1Q6ZNC8 495 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 USP50Q70EL3 339 aaPredicted RBP3□□□□□ -1.93
BRCA1-212ENST00000473961 COX15Q7KZN9 410 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 STX12Q86Y82 276 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 BBS7Q8IWZ6 715 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 CPNE9Q8IYJ1 553 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 FAM9CQ8IZT9 166 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 KIR2DL5AQ8N109 375 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 C11orf42Q8N5U0 333 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 SUMF2Q8NBJ7 301 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF680Q8NEM1 530 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 OR8K3Q8NH51 312 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 KIR2DL5BQ8NHK3 375 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 ZFAND1Q8TCF1 268 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 ACER1Q8TDN7 264 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 C1orf54Q8WWF1 131 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 MYDGFQ969H8 173 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 IL22RA2Q969J5 263 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 EEF1AKMT3Q96AZ1 226 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 TESCQ96BS2 214 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 DCPSQ96C86 337 aaKnown RBP3□□□□□ -1.93
BRCA1-212ENST00000473961 ASB9Q96DX5 294 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 RNF170Q96K19 258 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 ARL5BQ96KC2 179 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 FAM210BQ96KR6 192 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 CSPG4P5Q96PW8 444 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 OR2M2Q96R28 347 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 NRTNQ99748 197 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 APOL4Q9BPW4 351 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 ASB8Q9H765 288 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 UCK1Q9HA47 277 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 IFT46Q9NQC8 304 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 SDHAF3Q9NRP4 125 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 SLC25A37Q9NYZ2 338 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 IL37Q9NZH6 218 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 MAT2BQ9NZL9 334 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 ENOPH1Q9UHY7 261 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 FBXO5Q9UKT4 447 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 KIF25-AS1Q9Y6Z4 181 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF142P52746 1687 aaPredicted RBP3□□□□□ -1.93
BRCA1-212ENST00000473961 LAMB4A4D0S4 1761 aa3□□□□□ -1.93
BRCA1-212ENST00000473961 ZNFX1Q9P2E3 1918 aaKnown RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 PEAK1Q9H792 1746 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 MARF1Q9Y4F3 1742 aaKnown RBP2.99□□□□□ -1.93
BRCA1-212ENST00000473961 CLUHO75153 1309 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 NRCAMQ92823 1304 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 IGSF9BQ9UPX0 1349 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 LMO7Q8WWI1 1683 aa2.99□□□□□ -1.93
BRCA1-212ENST00000473961 A0A0X1KG70 313 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms