RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 A0A0U1RQV5 110 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 WIPF1O43516 503 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 IER3P46695 156 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 MAP2K3P46734 347 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 RAG2P55895 527 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 RPL15P61313 204 aaKnown RBP12.58□□□□□ -0.4
VTI1A-203ENST00000472892 ROM1Q03395 351 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 IKZF1Q13422 519 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 LRRC10Q5BKY1 277 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 FAHD1Q6P587 224 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 KCTD18Q6PI47 426 aaPredicted RBP12.58□□□□□ -0.4
VTI1A-203ENST00000472892 KCTD8Q6ZWB6 473 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 LDLRAD3Q86YD5 345 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 ZDHHC23Q8IYP9 409 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 KIR3DL3Q8N743 410 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 ANGPTL6Q8NI99 470 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 NPRL2Q8WTW4 380 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 DYRK2Q92630 601 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 MED30Q96HR3 178 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 HIST1H2AAQ96QV6 131 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 MROQ9BYG7 248 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 OR51I2Q9H344 312 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 PAPOLBQ9NRJ5 636 aaKnown RBP12.58□□□□□ -0.4
VTI1A-203ENST00000472892 SNTG1Q9NSN8 517 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 DNAJB11Q9UBS4 358 aa12.58□□□□□ -0.4
VTI1A-203ENST00000472892 ZNF816-ZNF321PA0A0X1KG74 233 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 TMEM269A0A1B0GVZ9 245 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 CCDC182A6NF36 153 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 AKR7A2O43488 359 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 ZNF254O75437 659 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 DNAJC8O75937 253 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-203ENST00000472892 IGLV3-1P01715 115 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 IGHV4-59P01825 116 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 ACAA1P09110 424 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-203ENST00000472892 ATP6V1B1P15313 513 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 DAPP51397 102 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 GPM6AP51674 278 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 GMFBP60983 142 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 PTGES3Q15185 160 aaKnown RBP12.57□□□□□ -0.4
VTI1A-203ENST00000472892 CEACAM21Q3KPI0 293 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 C1orf122Q6ZSJ8 110 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 PDZD9Q8IXQ8 264 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 ZNF679Q8IYX0 411 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 CMTM4Q8IZR5 234 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 Q8N7P7 452 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 UTP4Q969X6 686 aaKnown RBP12.57□□□□□ -0.4
VTI1A-203ENST00000472892 GAFA1Q96PS6 74 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 ONECUT1Q9UBC0 465 aa12.57□□□□□ -0.4
VTI1A-203ENST00000472892 CLPSL1A2RUU4 121 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 NKX6-3A6NJ46 265 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 PRR32B1ATL7 298 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 PSMD9O00233 223 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 RHBDL1O75783 438 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 KNG1P01042 644 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 SELLP14151 372 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 GNG3P63215 75 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 EFNB1P98172 346 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 GUCA2AQ02747 115 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 DGUOKQ16854 277 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 OLFML2AQ68BL7 652 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 TREML4Q6UXN2 200 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 OR5A2Q8NGI9 324 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 FAM81AQ8TBF8 368 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 WFDC12Q8WWY7 111 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 ASB17Q8WXJ9 295 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 TNFRSF14Q92956 283 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 OR8B4Q96RC9 309 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 PBOV1Q9GZY1 135 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 NLKQ9UBE8 527 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 SLC25A10Q9UBX3 287 aaPredicted RBP12.56□□□□□ -0.4
VTI1A-203ENST00000472892 TMEM14AQ9Y6G1 99 aa12.56□□□□□ -0.4
VTI1A-203ENST00000472892 OR2AT4A6NND4 320 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 ZNF732B4DXR9 585 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 RNASEK-C17orf49H0YIS7 233 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 SIGLEC5O15389 551 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 GSC2O15499 205 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 PRKYO43930 277 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 GPR137BO60478 399 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 TFF1P04155 84 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 MRPL3P09001 348 aaKnown RBP12.55□□□□□ -0.4
VTI1A-203ENST00000472892 GLRA1P23415 457 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 CAV3P56539 151 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 ESRRGP62508 458 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 RIPPLY1Q0D2K3 151 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 ZBTB37Q5TC79 503 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 LCN1P1Q5VSP4 162 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 C17orf107Q6ZR85 190 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 ZNF671Q8TAW3 534 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 OR51E1Q8TCB6 317 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 BCAS4Q8TDM0 211 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 H1FXQ92522 213 aaKnown RBP12.55□□□□□ -0.4
VTI1A-203ENST00000472892 PPP1R14AQ96A00 147 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 DPAGT1Q9H3H5 408 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 GPR84Q9NQS5 396 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 SIRT7Q9NRC8 400 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 FAM53CQ9NYF3 392 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 NUFIP1Q9UHK0 495 aaKnown RBP12.55□□□□□ -0.4
VTI1A-203ENST00000472892 COPS3Q9UNS2 423 aa12.55□□□□□ -0.4
VTI1A-203ENST00000472892 CAB39Q9Y376 341 aaPredicted RBP12.55□□□□□ -0.4
VTI1A-203ENST00000472892 FAM96BQ9Y3D0 163 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 460.2 ms